LOCUS BC047691 1243 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens cytochrome b-561 domain containing 2, mRNA (cDNA clone
MGC:51893 IMAGE:6060648), complete cds.
ACCESSION BC047691
VERSION BC047691.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1243)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1243)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31541779.
FEATURES Location/Qualifiers
source 1..1243
/db_xref="H-InvDB:HIT000053203"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51893 IMAGE:6060648"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1243
/gene="CYB561D2"
/gene_synonym="101F6"
/gene_synonym="TSP10"
/db_xref="GeneID:11068"
/db_xref="HGNC:HGNC:30253"
/db_xref="MIM:607068"
CDS 211..879
/gene="CYB561D2"
/gene_synonym="101F6"
/gene_synonym="TSP10"
/codon_start=1
/product="cytochrome b-561 domain containing 2"
/protein_id="AAH47691.1"
/db_xref="GeneID:11068"
/db_xref="HGNC:HGNC:30253"
/db_xref="MIM:607068"
/translation="MALSAETESHIYRALRTASGAAAHLVALGFTIFVAVLARPGSSL
FSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSRKGRARCHWVLQLLALLCALLGLG
LVILHKEQLGKAHLVTRHGQAGLLAVLWAGLQCSGGVGLLYPKLLPRWPLAKLKLYHA
TSGLVGYLLGSASLLLGMCSLWFTASVTGAAWYLAVLCPVLTSLVIMNQVSNAYLYRK
RIQP"
BASE COUNT 252 a 356 c 345 g 290 t
ORIGIN
1 gtcgcacccg gaagtaaagc ggctccgtga cggagcggcg gtgcgcgcgg cagggcccgg
61 agtatcccgc tttctttgga ggaaaccacc gcatcagatc tgcgctgcgg cagaggcagc
121 cttttctcca gtgaggagtg aacagtgggc acctgagatc ctggcccacg ctactatgct
181 ttcaggctac aaccactagc acggctgacg atggcccttt ctgcggagac cgagtcacac
241 atctaccgag ctctgcgtac tgcttctggc gctgccgccc accttgtggc cctgggcttt
301 accatctttg tggctgtgct tgccaggcct ggctccagcc tgttctcctg gcacccggtg
361 cttatgtctt tggctttctc cttcctgatg accgaggcac tactggtgtt ttctcctgag
421 agttcgctgc tgcactccct ctcacggaaa ggccgagcac gctgccactg ggtgctgcag
481 ctgctggccc tgctgtgtgc actgctgggc ctcggccttg tcatcctcca caaagagcag
541 cttggcaaag cccacctggt tacgcggcat gggcaggcag ggctgctggc tgtgctgtgg
601 gcagggctgc agtgctcagg tggggtgggg ctgctctacc ccaagctgct gccccgatgg
661 cccctggcga agctcaagct ataccatgct acttctgggc tggtgggcta cctgctgggt
721 agtgccagcc tcttgctggg catgtgctca ctctggttca ctgcctctgt cactggtgca
781 gcctggtacc tggctgtatt atgccctgtc ctcaccagct tggtcattat gaaccaggtg
841 agcaatgcct acctataccg caagaggatc caaccatgag ctcttcccag cctaggggaa
901 gcctggattt gcccctccat gtaggagctg ggcctaggga cctgttgaac tctctcagct
961 gagtcagggg acacctcagg cactgggaca gttgggcatt tggaggcccg tgtgtgaatt
1021 cctgctcctc atgctggagt gcctcccatt tccttcccct ttctctgtca tcccagagga
1081 acataggcat catgtgtctg gatgaagctg gggctgcaag actgcctctc ctgcaaggca
1141 gctcatactt gtactgtatg ttcagaaatt ttaggagaga aaaaagtaaa aaatttgtaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//