LOCUS BC047535 3012 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens A kinase (PRKA) anchor protein 3, mRNA (cDNA clone
MGC:41847 IMAGE:5267552), complete cds.
ACCESSION BC047535
VERSION BC047535.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3012)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3012)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: c Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21493040.
FEATURES Location/Qualifiers
source 1..3012
/db_xref="H-InvDB:HIT000053163"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41847 IMAGE:5267552"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3012
/gene="AKAP3"
/gene_synonym="AKAP110"
/gene_synonym="FSP95"
/gene_synonym="PRKA3"
/gene_synonym="SOB1"
/db_xref="GeneID:10566"
/db_xref="HGNC:HGNC:373"
/db_xref="MIM:604689"
CDS 210..2771
/gene="AKAP3"
/gene_synonym="AKAP110"
/gene_synonym="FSP95"
/gene_synonym="PRKA3"
/gene_synonym="SOB1"
/codon_start=1
/product="A kinase (PRKA) anchor protein 3"
/protein_id="AAH47535.1"
/db_xref="GeneID:10566"
/db_xref="HGNC:HGNC:373"
/db_xref="MIM:604689"
/translation="MSEKVDWLQSQNGVCKVDVYSPGDNQAQDWKMDTSTDPVRVLSW
LRRDLEKSTAEFQDVRFKPGESFGGETSNSGDPHKGFSVDYYNTTTKGTPERLHFEMT
HKEIPCQGPRAQLGNESSVDEVSFYANRLTNLVIAMARKEINEKIDGSENKCVYQSLY
MGNEPTPTKSLSKIASELVNETVSACSRNAAPDKAPGSGDRVSGSSQSPPNLKYKSTL
KIKESTKERQGPDDKPPSKKSFFYKEVFESRNGDYAREGGRFFPRERKRFRGQERPDD
FTASVSEGIMTYANSVVSDMMVSIMKTLKIQVKDTTIATILLKKVLLKHAKEVVSDLI
DSFLRNLHSVTGTLMTDTQFVSAVKRTVFSHGSQKATDIMDAMLRKLYNVMFAKKVPE
HVRKAQDKAESYSLISMKGMGDPKNRNVNFAMKSETKLREKMYSEPKSEEETCAKTLG
EHIIKEGLTLWHKSQQKECKSLGFQHAAFEAPNTQRKPASDISFEYPEDIGNLSLPPY
PPEKPENFMYDSDSWAKDLIVSALLLIQYHLAQGGRRDARSFVEAAGTTNFPANEPPV
APDESCLKSAPIVGDQEQAEKKDLRSVFFNFIRNLLSETIFKRDQSPEPKVPEQPVKE
DRKLCERPLASSPPRLYEDDETPGALSGLTKMAVSQIDGHMSGQMVEHLMNSVMKLCV
IIAKSCDASLAELGDDKSGDASRLTSAFPDSLYECLPAKGTGSAEAVLQNAYQAIHNE
MRGTSGQPPEGCAAPTVIVSNHNLTDTVQNKQLQAVLQWVAASELNVPILYFAGDDEG
IQEKLLQLSAAAVDKGCSVGEVLQSVLRYEKERQLNEAVGNVTPLQLLDWLMVNL"
BASE COUNT 877 a 717 c 718 g 700 t
ORIGIN
1 aggaaacaag atcttgagct gagcaagaac atcccagcat cttcattgac tttaaaagta
61 tattctggag tcttccgtgg ttcactattc cagtactaca gagattcctt atattacatg
121 gcaggagggg ggtaaactga gggatagtga agacaacaat aaattaatca agagctttcc
181 tcatatctca gaacctatcc tctgtaagaa tgtcagaaaa ggttgactgg ttacaaagcc
241 aaaatggagt atgcaaagtt gatgtctatt ctcctggaga caaccaagcc caggactgga
301 aaatggacac ctccacggat cctgtcagag tgctcagctg gctccgcaga gacctggaga
361 agagtacagc agagttccaa gatgttcggt tcaaacccgg agaatcattt ggtggggaaa
421 cgtccaactc aggagaccca cacaaaggtt tctctgtaga ctattacaac accaccacca
481 agggcactcc agaaagattg cattttgaga tgactcacaa agagattcct tgccagggcc
541 ccagggccca acttggcaac gagagttcag tagatgaagt ttccttctat gctaaccgcc
601 tcacgaatct agtcatagcc atggcccgca aagagatcaa tgagaagatc gatggctctg
661 aaaacaaatg tgtctatcag tcattgtaca tggggaatga acccacaccc accaaaagcc
721 tcagtaagat agcatcagag cttgtgaatg agaccgtctc tgcatgttcc aggaatgctg
781 ccccagacaa ggctcctggc tctggagaca gagtctcagg atcatcacaa agtcccccaa
841 atttgaaata caagtccact ttgaagatca aggagagcac caaagaaaga cagggtccag
901 atgacaagcc tccttctaag aagtctttct tctataagga agtgtttgaa tctcgtaacg
961 gagattatgc cagagagggt ggaaggttct ttcctcggga gagaaagagg tttcgagggc
1021 aggaaaggcc tgatgacttt acggcttctg ttagtgaagg gatcatgacc tatgctaaca
1081 gtgtggtatc tgatatgatg gtctccatca tgaagacact gaagatccaa gtgaaagaca
1141 caaccattgc caccatccta ctgaagaagg ttctgctcaa gcatgcaaaa gaggtggtct
1201 cggatctcat cgactccttc ttgaggaatc tccacagcgt cacagggacc ctcatgactg
1261 acacacagtt tgtctcggct gtgaaaagaa ctgtcttctc tcatggaagc caaaaggcca
1321 cagatatcat ggatgccatg ctaaggaagc tgtacaatgt aatgtttgcc aagaaagtcc
1381 ctgagcatgt caggaaagcc caagacaagg ctgagagtta ttccctcatc tccatgaaag
1441 gaatgggtga tcctaaaaac cgaaatgtga actttgccat gaaatctgaa actaaattga
1501 gagaaaaaat gtattctgaa cccaaatcag aggaggagac ttgtgcgaaa actctgggtg
1561 agcacattat caaagagggg cttaccctgt ggcataaaag tcagcagaaa gaatgtaaat
1621 ctctaggttt ccagcatgca gcattcgaag ctcccaacac acagcgtaag cctgcatcag
1681 acatttcctt tgagtaccct gaagatattg gcaacctcag ccttcctcca tatcctccag
1741 agaaacctga gaattttatg tatgattcag actcctgggc caaggacctg atcgtgtctg
1801 ccctgcttct gattcaatat cacctggccc agggaggaag aagggatgca cggagcttcg
1861 ttgaagctgc tggcaccacc aactttcctg ccaatgaacc tcctgtagct cccgatgaat
1921 cttgccttaa gtctgctccc attgtaggtg accaagaaca agcagaaaag aaggacctaa
1981 ggagtgtttt ctttaatttc atccggaact tacttagtga gaccattttc aagcgtgacc
2041 agagccctga acccaaggtg ccggaacagc cagttaagga agataggaag ttgtgtgaaa
2101 gaccgttggc gtcttctccc cccaggctat atgaggatga tgagacccct ggtgcccttt
2161 ctgggctgac caagatggct gtcagccaga tagatggcca catgagtggg cagatggtag
2221 aacatctgat gaactcagtg atgaagctgt gtgtcatcat tgctaagtcc tgtgatgctt
2281 cgttggcaga gctgggagat gacaagtctg gagatgccag taggctaact tcggccttcc
2341 cagatagttt atatgagtgc ttaccagcca agggcacagg gtcagcagaa gctgtcctgc
2401 agaatgccta tcaagctatc cataatgaaa tgagaggcac atcaggacag ccccctgaag
2461 ggtgtgcagc acccacggtg attgtcagca atcacaacct aacggacaca gttcagaaca
2521 agcaactcca agccgtcctc caatgggtag ctgcctctga gctcaatgtc cctattttgt
2581 attttgctgg tgatgatgaa gggatccagg agaagctact tcagctctca gctgctgctg
2641 tggacaaagg atgcagtgtg ggcgaggttc tgcagtcggt gctgcgctat gagaaggagc
2701 gccagctgaa tgaggcggtg gggaatgtca caccgctgca gctgctggac tggctgatgg
2761 tgaacctgta atcggcaacc ccactgcttt cccctcttct ggcagtggag ccggccctta
2821 tccccgccct tctttctcac ttccacatct ccccctctat atcctcacag agccctaaca
2881 ttatcttcac accactctca tcaaagacat gtcatcttgt gctagccact ggattttgca
2941 gattttcctg tccatgcaag caaggacgta aaattaaaaa attacaatta aagggcaaaa
3001 aaaaaaaaaa aa
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