LOCUS BC047528 3424 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens translocase of outer mitochondrial membrane 40 homolog
(yeast), mRNA (cDNA clone MGC:33942 IMAGE:5297619), complete cds.
ACCESSION BC047528
VERSION BC047528.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3424)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3424)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: m Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..3424
/db_xref="H-InvDB:HIT000053160"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33942 IMAGE:5297619"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3424
/gene="TOMM40"
/gene_synonym="C19orf1"
/gene_synonym="D19S1177E"
/gene_synonym="PER-EC1"
/gene_synonym="PEREC1"
/gene_synonym="TOM40"
/db_xref="GeneID:10452"
/db_xref="MIM:608061"
CDS 96..1085
/gene="TOMM40"
/gene_synonym="C19orf1"
/gene_synonym="D19S1177E"
/gene_synonym="PER-EC1"
/gene_synonym="PEREC1"
/gene_synonym="TOM40"
/codon_start=1
/product="TOMM40 protein"
/protein_id="AAH47528.1"
/db_xref="GeneID:10452"
/db_xref="MIM:608061"
/translation="MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSL
GAGTSTSRSSERTPGAATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVK
LTVNKGLSNHFQVNHTVALSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSL
NAQVIHQLGPGLRSKMAIQTQQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILV
AHYLQSITPCLALGGELVYHRRPGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYH
KASDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFKGKGLGSPTRETGRR"
BASE COUNT 748 a 962 c 1054 g 660 t
ORIGIN
1 tgggtggcgg cggcggcagc gggttcggtt gcgcgtggcg cacggggtgg gagcggagcc
61 caggccggga gcaggcgccg ccgccacagg cgaccatggg gaacgtgttg gctgccagct
121 cgccgcccgc agggccgcca ccgccgcctg cgccggccct cgtggggctg ccgccacctc
181 cgccctcgcc gccgggcttc acgctgccgc cgctgggagg cagcctgggc gccggcacca
241 gtacgagtcg aagttcggaa cggacccccg gggctgcaac cgccagcgcc tcaggggccg
301 ccgaggatgg ggcctgcggc tgcctgccca acccgggcac attcgaggag tgccaccgga
361 agtgcaagga gctgtttccc attcagatgg agggtgtcaa gctcacagtc aacaaagggt
421 tgagtaacca ttttcaggtc aaccacacag tagccctcag cacaatcggg gagtccaact
481 accacttcgg ggtcacatat gtggggacaa agcagctgag tcccacagag gcgttccctg
541 tactggtggg tgacatggac aacagtggca gtctcaacgc tcaggtcatt caccagctgg
601 gccccggtct caggtccaag atggccatcc agacccagca gtcgaagttt gtgaactggc
661 aggtggacgg ggagtatcgg ggctctgact tcacagcagc cgtcaccctg gggaacccag
721 acgtcctcgt gggttcagga atcctcgtag cccactacct ccagagcatc acgccttgcc
781 tggccctggg tggagagctg gtctaccacc ggcggcctgg agaggagggc actgtcatgt
841 ctctagctgg gaaatacaca ttgaacaact ggttggcaac ggtaacgttg ggccaggcgg
901 gcatgcacgc aacatactac cacaaagcca gtgaccagct gcaggtgggt gtggagtttg
961 aggccagcac aaggatgcag gacaccagcg tctccttcgg gtaccagctg gacctgccca
1021 aggccaacct cctcttcaaa ggtaaaggtc tcggttcccc tacgcgggaa acaggcagga
1081 ggtgactcaa ctctgagtgg atgtgtgggc caccacaggt gctggaggac agtgtgctgc
1141 caccctgtgg gcctccacat taccggggaa cacttgttaa aaggtaggtg gggccgggtg
1201 cggtggctcg cgcctgtagt cccagcactt tgggaggcca aggcgggccg aggtaaggag
1261 attgagacca tcctggctaa cacggtgaaa ctccgtctct actaaaaata caaaaacaaa
1321 attagccggg tgtggttgcg ggtgcctgtg gtcccagcta ctgaggctga ggcgggaaaa
1381 tggtatgagc ccgggaggcg gagcttgcgg tgagccgaga tcgtgccacc gcactccagc
1441 ctgggcgaca gagcaagact ccatctcaaa aaaaaaaaag taggtggaca accctctact
1501 atgttttatg cttggaaaaa aaaagtaggt agagcggcca ggcgtggtga ctcgcgcctg
1561 taatcccagc attttgggag gccaagccag gtagaatact tggggccagg agttggagac
1621 cagcctggcc aacgtggtga aatcccctct ctactaaaag tacaaaaatt ggccaggtgt
1681 ggtggcgtgc tgcaactgtg gtccccgcta cttaggaggc tgaggcacaa gaatcacttg
1741 aacctgggag gcggaggttg cagggagttg agactgcacc actgcactcc agcctgggtg
1801 acagagtgag actccatctc caaaaaaaat aaaatgaaat aaataaataa atgttaaaaa
1861 aatctggtgg agcatctgat gggtgtttgg gccaagctgg agctttgtcc atcccctctt
1921 atttttctgc acttgactct cttatttttc tgagactggt ctccctctgt cgcccaggct
1981 ggagtgcagc agtccaactg cggctcactg cggcctccac ctcccgggct caagcagcct
2041 tcccgcctcg gcctcctgag tagctgggac cacaggtgta tgccaccagg cccagctaat
2101 ttttttgata gttttgggag acatgggggt ttcaccgtgt tgcccaggct ggtctcgaac
2161 tcctggactc aagccttggc ctcccaaagt gctgggatta taggtgtgag ccaccacacc
2221 cagccagggt agaaggcact ttggaagcct cgagcctgcc ccattcatct tacgttagtg
2281 gaaactgagg cttccagagg tttcaaggtc acaactaaat ccagaacctc atctcaggca
2341 cactggtcgt agtcccaatg tccagtctta agtcttcttg gatatctgtg gctcacagat
2401 tttgggtgtt tgagcctcct gctgagcact gctggggcca cagcggtgac cagccctgtc
2461 ttcacgggac tcagtgagag gaacagattc atccgcagag tgggcaggac taggttgggg
2521 gaacccaggg gtctagaggg cttttcagag ggcaggggtc actgagcgga gagcagagga
2581 ggagtgagcc atttgctcca gcgtgaagtt gttggtgtga tggggtttca gggtggcagg
2641 agcagtgtgg ttaaaggtct ggaagctgtc ggcatgtggc tggtatccaa ggtggccagg
2701 aactctgcat ggatatggtg ggaagctggc acgcctctca cctcagctct tccctgcagg
2761 ctctgtggat agcaactgga tcgtgggtgc cacgctggag aagaagctcc cacccctgcc
2821 cctgacactg gcccttgggg ccttcctgaa tcaccgcaag aacaggtttc agtgtggctt
2881 tggcctcacc atcggctgag ccctcctggc ccccgccttc cacgcccttc cgattccacc
2941 tccacctcca cctccccctg ccacagaggg gagacctgag cccccctccc ttccctcccc
3001 ccttgggggt cgggggggga cattggaaag gagggacccc gccaccccag cagctgagga
3061 ggggattctg gaactgaatg gcgcttcggg attctgagta gcaggggcag catgcccagt
3121 gggcctgggg tcccgggagg gattccggaa ttgaggggca cgcaggattc tgagcaccag
3181 gggcagaggc ggccagacaa cctcagggag gagtgtcctg gcgtccccat cctccaaagg
3241 gcctgggccc gccccgaggg ggcagcgaga ggagcttccc catccccggt cagtccaccc
3301 tgccccgtcc actttcccat ctcctcggta taaatcatgt ttataagtta tggaagaacc
3361 gggacatttt acagaaaaaa aacaaaaaac aacaaaaaat atacgtggga aaaaaaaaaa
3421 aaaa
//