LOCUS BC047518 842 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens tubulin, beta 3, mRNA (cDNA clone IMAGE:5276469),
partial cds.
ACCESSION BC047518
VERSION BC047518.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 842)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 842)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: f Column: 16.
FEATURES Location/Qualifiers
source 1..842
/db_xref="H-InvDB:HIT000098637"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5276469"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..>842
/gene="TUBB3"
/gene_synonym="beta-4"
/gene_synonym="MC1R"
/gene_synonym="TUBB4"
/db_xref="GeneID:10381"
/db_xref="MIM:602661"
CDS <1..>842
/gene="TUBB3"
/gene_synonym="beta-4"
/gene_synonym="MC1R"
/gene_synonym="TUBB4"
/codon_start=3
/product="TUBB3 protein"
/protein_id="AAH47518.1"
/db_xref="GeneID:10381"
/db_xref="MIM:602661"
/translation="ILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYT
EGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMN
TFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYG
DLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQY
RALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSS
YFVE"
BASE COUNT 163 a 281 c 253 g 145 t
ORIGIN
1 ccattctggt ggacctggaa cccggaacca tggacagtgt ccgctcaggg gcctttggac
61 atctcttcag gcctgacaat ttcatctttg gtcagagtgg ggccggcaac aactgggcca
121 agggtcacta cacggagggg gcggagctgg tggattcggt cctggatgtg gtgcggaagg
181 agtgtgaaaa ctgcgactgc ctgcagggct tccagctgac ccactcgctg gggggcggca
241 cgggctccgg catgggcacg ttgctcatca gcaaggtgcg tgaggagtat cccgaccgca
301 tcatgaacac cttcagcgtc gtgccctcac ccaaggtgtc agacacggtg gtggagccct
361 acaacgccac gctgtccatc caccagctgg tggagaacac ggatgagacc tactgcatcg
421 acaacgaggc gctctacgac atctgcttcc gcaccctcaa gctggccacg cccacctacg
481 gggacctcaa ccacctggta tcggccacca tgagcggagt caccacctcc ttgcgcttcc
541 cgggccagct caacgctgac ctgcgcaagc tggccgtcaa catggtgccc ttcccgcgcc
601 tgcacttctt catgcccggc ttcgcccccc tcacagcccg gggcagccag cagtaccggg
661 ccctgaccgt gcccgagctc acccagcaga tgttcgatgc caagaacatg atggccgcct
721 gcgacccgcg ccacggccgc tacctgacgg tggccaccgt gttccggggc cgcatgtcca
781 tgaaggaggt ggacgagcag atgctggcca tccagagcaa gaacagcagc tacttcgtgg
841 ag
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