LOCUS BC047508 4597 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens bromodomain containing 1, mRNA (cDNA clone MGC:48300
IMAGE:5267185), complete cds.
ACCESSION BC047508
VERSION BC047508.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4597)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4597)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: a Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11321641.
FEATURES Location/Qualifiers
source 1..4597
/db_xref="H-InvDB:HIT000053151"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48300 IMAGE:5267185"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4597
/gene="BRD1"
/gene_synonym="BRL"
/gene_synonym="BRPF1"
/gene_synonym="BRPF2"
/gene_synonym="DKFZP434B094"
/db_xref="GeneID:23774"
/db_xref="MIM:604589"
CDS 63..3632
/gene="BRD1"
/gene_synonym="BRL"
/gene_synonym="BRPF1"
/gene_synonym="BRPF2"
/gene_synonym="DKFZP434B094"
/codon_start=1
/product="BRD1 protein"
/protein_id="AAH47508.1"
/db_xref="GeneID:23774"
/db_xref="MIM:604589"
/translation="MRRKGRCHRGSAARHPSSPCSVKHSPTRETLTYAQAQGMVEIEI
EGRLHRISIFDPLEIILEDDLTAQEMSECNSNKENSERPPVCLRTKRHKNNRVKKKNE
ALPSAHGTPASASALPEPKVRIVEYSPPSAPRRPPVYYKFIEKSAEELDNEVEYDMDE
EDYAWLEIVNEKRKGDCVPAVSQSMFEFLMDRFEKESHCENQKQGEQQSLIDEDAVCC
ICMDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRARPADCVLCHN
KGGAFKKTDDDRWGHVVCALWIPEVGFANTVFIEPIDGVRNIPPARWKLTCYLCKQKG
VGACIQCHKANCYTAFHVTCAQKAGLYMKMEPVKELTGGGTTFSVRKTAYCDVHTPPG
CTRRPLNIYGDVEMKNGVCRKESSVKTVRSTSKVRKKAKKAKKALAEPCAVLPTVCAP
YIPPQRLNRIANQVAIQRKKQFVERAHSYWLLKRLSRNGAPLLRRLQSSLQSQRSSQQ
RENDEEMKAAKEKLKYWQRLRHDLERARLLIELLRKREKLKREQVKVEQVAMELRLTP
LTVLLRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNL
HEFEEDFDLIIDNCMKYNARDTVFYRAAVRLRDQGGVVLRQARREVDSIGLEEASGMH
LPERPAAAPRRPFSWEDVDRLLDPANRAHLGLEEQLRELLDMLDLTCAMKSSGSRSKR
AKLLKKEIALLRNKLSQQHSQPLPTGPGLEGFEEDGAALGPEAGEEGDKSPPKLEPSD
ALPLPSNSETNSEPPTLKPVELNPEQSKLFKRVTFDNESHSACTQSALVSGRPPEPTR
ASSGDVPAAAASAVAEPASDVNRRTSVLFCKSKSVSPPKSAKNTETQPTSPQLGTKTF
LSVVLPRLETLLQPRKRSRSTCGDSEVEEESPGKRLDAGLTNGFGGARSEQEPGGGLG
RKATPRRRCASESSISSSNSPLCDSSFNAPKCGRGKPALVRRHTLEDRSELISCIENG
NYAKAARIAAEVGQSSMWISTDAAASVLEPLKVVWAKCSGYPSYPALIIDPKMPRVPG
HHNGVTIPAPPLDVLKIGEHMQTKSDEKLFLVLFFDNKRSWQWLPKSKMVPLGIDETI
DKLKMMEGRNSSIRKAVRIAFDRAMNHLSRVHGEPTSDLSDID"
BASE COUNT 1127 a 1197 c 1310 g 963 t
ORIGIN
1 gagtccgcgg ccgccgctgc cgggcccgga gtccgcggcg ccccgaaggt aatcattacc
61 aaatgaggag gaaaggacga tgtcatcgag gctctgcagc gaggcatcct tcttccccat
121 gcagtgttaa acactcccct acgcgagaaa cgctgaccta cgctcaagct caagggatgg
181 tagagataga aattgaaggg cgcttgcaca ggatcagtat ttttgatccc ctggagatca
241 tattggaaga tgacctcact gctcaagaga tgagtgagtg caacagcaac aaggaaaaca
301 gcgagcggcc tcctgtctgc ttaagaacta agcgtcacaa aaacaacaga gtcaaaaaga
361 aaaacgaggc cctccccagc gcccacggca cgccggcctc ggccagtgcc ctcccggagc
421 ccaaggtgcg catcgtggag tacagccctc cgtccgcccc caggaggcct cctgtgtact
481 acaagttcat cgagaagtcg gccgaggaac tggacaacga ggtggagtat gacatggacg
541 aggaggacta tgcctggctg gagatcgtca atgagaagcg caagggcgac tgcgtccccg
601 ccgtgtcgca gagcatgttt gagttcctga tggaccgctt cgagaaggag tcgcactgcg
661 agaaccagaa gcagggcgag cagcagtctc tgatcgacga ggacgccgtg tgctgcatct
721 gcatggacgg ggagtgtcag aacagcaacg tgatcctctt ctgcgacatg tgcaacctgg
781 ccgtgcacca ggagtgctac ggggtgccct acatccccga gggccagtgg ctctgccgcc
841 actgcctgca gtcgcgggcc cggcccgccg actgtgtgct gtgccacaac aagggtggtg
901 ccttcaaaaa gacagatgac gaccgctggg gtcacgtggt gtgtgccctg tggatcccag
961 aggtcggctt tgccaacacg gtgttcatcg agcccatcga tggggtgagg aacatccctc
1021 cagcccggtg gaaactgaca tgctacctct gtaagcagaa gggcgtgggt gcctgcatcc
1081 agtgccacaa agcaaactgc tacacagcat tccatgtgac gtgtgcccag aaggctggcc
1141 tgtacatgaa aatggagccc gtgaaggaac tgactggcgg tggcaccacc ttctccgtca
1201 gaaagaccgc ttactgtgat gtccacacgc ctccaggctg cacccggagg cctctgaata
1261 tttacgggga tgtcgaaatg aaaaatggcg tctgtcgaaa agagagctcg gttaaaacgg
1321 tcaggtccac atccaaggtc aggaagaagg caaaaaaggc taagaaagct ctggctgagc
1381 cctgcgcggt cctgccgacc gtgtgcgctc cttatattcc cccgcagagg ttaaatagga
1441 ttgcgaatca ggtggccatt cagcggaaga agcagtttgt ggagcgagcc cacagctact
1501 ggctgctcaa gcggctgtcc aggaacgggg cccccctgct gcggcggctg cagtccagcc
1561 tgcagtctca gcgaagctca cagcagagag aaaatgatga ggagatgaag gctgccaaag
1621 agaagctgaa gtactggcag cggctgcggc acgacctgga gcgcgctcgc ctgctgatcg
1681 agctgctgcg caagcgggag aagctcaagc gtgagcaggt gaaggtggag caggtcgcca
1741 tggagctgcg gctgaccccg ctgacggtgc tgctgcgctc agtgctggac cagctgcaag
1801 acaaggaccc cgccaggata tttgcgcagc ccgtgagtct gaaggaggta ccagattatt
1861 tggatcacat taaacatccc atggactttg ccacaatgag gaaacggtta gaagctcaag
1921 ggtataaaaa cctccatgag tttgaggagg attttgatct cattatagat aactgcatga
1981 agtacaatgc cagggacacc gtgttctata gagccgcggt gaggctgcgc gatcagggag
2041 gtgttgttct gaggcaggcc cggcgcgagg tggacagcat cggcttggaa gaggcctcgg
2101 ggatgcacct gcctgagcgg cctgctgcgg caccgcggcg gcctttctcc tgggaagacg
2161 tggacaggtt gctggacccc gccaacagag cccacctggg cctggaggag cagctgagag
2221 agctgctgga catgctcgac ctcacctgcg ctatgaagtc cagcggctcc cggagcaagc
2281 gggcaaagct gctcaaaaag gaaattgccc ttctccgaaa caagctgagc cagcagcaca
2341 gccagcccct gcccacgggg ccaggcttgg aaggcttcga agaggacgga gctgcgctgg
2401 ggccggaggc gggcgaggaa ggagataaat ctccccctaa acttgaacca tcagatgcat
2461 tacctcttcc ttcaaactcg gagactaatt cagaaccacc aaccctcaaa ccagtagaac
2521 tcaacccaga gcagagtaaa cttttcaaaa gagtcacatt tgataatgaa tcacatagcg
2581 cttgcactca gagcgcactg gtaagcggac gccctccaga gcccacccgc gccagtagtg
2641 gcgatgtgcc ggcggcggcg gcctccgcgg tggcggagcc agcaagcgat gtaaacagac
2701 gcacttctgt tctcttctgc aaatcgaaaa gtgtaagccc cccaaagtct gccaagaaca
2761 ctgaaaccca gccaacttct cctcagctag ggaccaaaac ctttttgtcc gtagtccttc
2821 cgaggttgga gactcttctg cagccaagga aaaggtcgcg gagcacatgc ggagactccg
2881 aggtggagga ggagtcccca ggaaagcgcc tggacgcagg tctcaccaac ggctttgggg
2941 gtgcgaggag cgagcaggag ccgggcggcg gcctggggag gaaggccaca ccccgacgac
3001 gctgtgcctc cgagtccagc atctcctcca gcaacagccc gctctgcgac tcgagcttta
3061 atgcgcccaa atgtgggcgg ggcaaaccgg ctcttgtgcg acggcacacg ctggaggacc
3121 gcagtgagct gatctcctgc atcgagaatg ggaactacgc caaggcggcc aggatcgcag
3181 ccgaagtcgg ccagagcagc atgtggatct ccactgatgc cgccgcctcg gtgctggagc
3241 ctctgaaggt ggtgtgggcc aagtgcagcg gctacccctc ctacccggca ctgatcatcg
3301 accccaagat gccccgtgtg cctggccacc acaacggcgt caccatcccg gccccacccc
3361 tggacgtgct gaagattggg gagcacatgc agaccaagtc tgatgagaag ctgttcctcg
3421 ttctcttttt tgataataag agaagttggc agtggcttcc taagtccaaa atggttcccc
3481 ttggtattga cgaaactata gacaagttaa agatgatgga agggaggaat tccagcatcc
3541 ggaaggccgt gcggatcgct tttgaccgcg ccatgaacca cctgagccgc gtccacgggg
3601 agccgaccag cgacctcagt gacattgact gacggcccgg ccgccagcgc gggtcttgtc
3661 catagtgttg ataagctgta catgtttgta tattgttcaa aacttaactt attctgattt
3721 ttagttatag ctctttaatt ctttttcccc ggggaggggg gaggttttat ttccaagttt
3781 tctaggaacc catctccgtc tgggcgctgt gagtggggtg ggcacgtccg ggcagcccag
3841 tgcgtctgtc gcacgtcccc gggccgtgct gctggcgtca ctttctttga tatgtagctt
3901 tttcttaaag actcttgaat gtttaatagt tttgtaaatc atgctcttta cacagagtac
3961 cacttattta ataagacggg atgtaaattt acaatgacaa atgtgtattt taagaaagaa
4021 aatgacatta ttttgaatgg tactttgtgg aaagagggga gaataaagtt atgctgtgta
4081 catcacttgc agatcaccaa aaacactccg ctgcccgtga ccgccggtgg gtgtgtcccc
4141 gctcccgtcg tcccgcccac ctcaaacccc gcaggtgtgc ctcccagcgg attatttatt
4201 gtagaaagtg tattcatttg ctttataatg aaaaatacat ttgcaaaggt atattgatat
4261 gcatttttat acaggcacat aaaaattcaa cttggcttgg gagcagaatg cattgcattg
4321 tataaatgac tctggcctgt gtgtactttg attttataac ttgtaatctt ttgtttacaa
4381 tgaggggctt tctgtaactt gttttaattt agaacacttt ggtagcaata gaaactttgg
4441 atacattttt gtatggtacc tgtgatgtat atagaattag tactttattt ttatttttaa
4501 gaggtaaagc attatgttgg ggaaagtagg gtgggtttcc aaatttgcat tttttatatt
4561 aaaaataaag tcaagatttg gaaaaaaaaa aaaaaaa
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