LOCUS BC047295 1676 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glycoprotein M6B, mRNA (cDNA clone MGC:54284
IMAGE:4215095), complete cds.
ACCESSION BC047295
VERSION BC047295.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1676)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1676)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50263049.
FEATURES Location/Qualifiers
source 1..1676
/db_xref="H-InvDB:HIT000053103"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54284 IMAGE:4215095"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1676
/gene="GPM6B"
/gene_synonym="M6B"
/gene_synonym="MGC17150"
/gene_synonym="MGC54284"
/db_xref="GeneID:2824"
/db_xref="HGNC:HGNC:4461"
/db_xref="MIM:300051"
CDS 166..1083
/gene="GPM6B"
/gene_synonym="M6B"
/gene_synonym="MGC17150"
/gene_synonym="MGC54284"
/codon_start=1
/product="glycoprotein M6B"
/protein_id="AAH47295.1"
/db_xref="GeneID:2824"
/db_xref="HGNC:HGNC:4461"
/db_xref="MIM:300051"
/translation="MKPAMETAAEENTEQSQERKVNSRAEMEIGRYHWMYPGSKNHQY
HPVPTLGDRASPLSSPGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGT
VAILEQHFSTNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELH
GEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNG
TTGVEQICVDIRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATV
IALLIYMMATTYNYAVLKFKSREDCCTKF"
BASE COUNT 494 a 332 c 394 g 456 t
ORIGIN
1 cttttgcatc ttggaaggga ctgtaatcta ctgtagtgaa gaacagagcc tctcaatcag
61 acgggtgtaa ataagagacg gaggggagtc caaaagaaaa ggaagaggag gaaaaacaag
121 tgtgtgttgg ggggaacagg gggaaaagca tttttggtgg atggtatgaa gccagccatg
181 gaaactgcag ccgaggaaaa tactgaacaa agccaagaga gaaaagtgaa cagcagagct
241 gaaatggaaa ttggcaggta ccactggatg tacccaggct caaagaacca ccagtaccat
301 cccgtgccaa ccctggggga cagggctagc cccttgagca gtccaggctg ctttgaatgc
361 tgcatcaagt gtctgggagg agtcccctac gcctccctgg tggccaccat cctctgcttc
421 tccggggtgg ccttattctg cggctgtggg catgtggctc tcgcaggcac cgtggcgatt
481 cttgagcaac acttctccac caacgccagt gaccatgcct tgctgagcga ggtgatacaa
541 ctgatgcagt atgtcatcta tggaattgcg tcctttttct tcttgtatgg gatcattctg
601 ttggcagaag gcttttacac cacaagtgca gtgaaagaac tgcacggtga gtttaaaaca
661 accgcttgtg gccgatgcat cagtggaatg ttcgttttcc tcacctatgt gcttggagtg
721 gcctggctgg gtgtgtttgg tttctcagcg gtgcccgtgt ttatgttcta caacatatgg
781 tcaacttgtg aagtcatcaa gtcaccgcag accaacggga ccacgggtgt ggagcagatc
841 tgtgtggata tccgacaata cggtatcatt ccttggaatg ctttccccgg aaaaatatgt
901 ggctctgccc tggagaacat ctgcaacaca aacgagttct acatgtccta tcacctgttc
961 attgtggcct gtgcaggagc tggtgccacc gtcattgccc tgctgatcta catgatggct
1021 actacatata actatgcggt tttgaagttt aagagtcggg aagattgctg cactaaattc
1081 taaattgcat aaggagtttt agagagctat gctctgtagc atgaaatatc actgacactc
1141 cagactaaag cagagtctag gtttctgcaa ttttgttaca gtaatttgta aatagcttta
1201 gtaaactcac cttgcatggt agattaataa gatgacttac tgtacatgaa ttacacaata
1261 atgagatctg gtggctattt ccacattttg aaaaggattc agttatttac tgacagtggt
1321 gagcatcctt tttaaaataa tgttctcata cttaaacatt agagagcagt atctttaaat
1381 gaattattaa cactttggaa tacttacatt ttctgttatt tttgattgcc tgataaccag
1441 tttcaatgat gaaaatgaaa acaagtgctg aagatgaaat ggaagagaac cgttttaatc
1501 tggattttgt tttgtcacac ctggaaaata ctttgcaaat atgttctaaa ttgaaaacaa
1561 tttttttatg atcacatggt tcactaccaa atgaccctca aataagccag atgaaaattt
1621 gaagaaaaag gtcacccagt tctctggaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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