LOCUS BC047286 1625 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine rich repeat containing 6, mRNA (cDNA clone
MGC:51885 IMAGE:5168914), complete cds.
ACCESSION BC047286
VERSION BC047286.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1625)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1625)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: g Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31621308.
FEATURES Location/Qualifiers
source 1..1625
/db_xref="H-InvDB:HIT000053101"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51885 IMAGE:5168914"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1625
/gene="LRRC6"
/gene_synonym="LRTP"
/gene_synonym="TSLRP"
/db_xref="GeneID:23639"
/db_xref="HGNC:HGNC:16725"
CDS 75..1475
/gene="LRRC6"
/gene_synonym="LRTP"
/gene_synonym="TSLRP"
/codon_start=1
/product="leucine rich repeat containing 6"
/protein_id="AAH47286.1"
/db_xref="GeneID:23639"
/db_xref="HGNC:HGNC:16725"
/translation="MGWITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCR
DLKILYLQNNLIGKIENVSKLKKLEYLNLALNNIEKIENLEGCEELAKLDLTVNFIGE
LSSIKNLQHNIHLKELFLMGNPCASFDHYREFVVATLPQLKWLDGKEIEPSERIKALQ
DYSVIEPQIREQEKDHCLKRAKLKEEAQRKHQEEDKNEDKRSNAGFDGRWYTDINATL
SSLESKDHLQAPDTEEHNTKKLDNSEDDLEFWNKPCLFTPESRLETLRHMEKQRKKQE
KLSEKKKKVKPPRTLITEDGKALNVNEPKIDFSLKDNEKQIILDLAVYRYMDTSLIDV
DVQPTYVRVMIKGKPFQLVLPAEVKPDSSSAKRSQTTGHLVICMPKVGEVITGGQRAF
KSMKTTSDRSREQTNTRSKHMEKLEVDPSKHSFPDVTNIVQEKKHTPRRRPEPKIIPS
EEDPTFEDNPEVPPLI"
BASE COUNT 604 a 309 c 358 g 354 t
ORIGIN
1 gcaggggtga agggtgaaaa gcgtcattcg aggtccgggt ccggcttgcg gggtcagcga
61 actggagagg cgccatgggc tggatcacag aagatcttat tagacggaat gctgaacaca
121 acgactgtgt cattttttcc ctggaggaac tctcgttgca tcagcaagaa atagaaagac
181 tagaacacat tgataaatgg tgccgggatt taaaaattct ctatcttcaa aataatctta
241 ttgggaaaat tgaaaatgtt agcaaactca agaaacttga atatttgaat ttagctttaa
301 acaacattga aaaaatagaa aacttggaag gatgtgaaga gctggcaaaa cttgacctga
361 ctgtgaattt cattggagag ctgagcagca ttaaaaactt gcagcacaat atccatctga
421 aggagctctt tctcatgggg aacccatgtg cttcctttga ccactatagg gagttcgtgg
481 tagcaactct tccacaatta aagtggttgg atggtaaaga aatagagcct tcagaaagga
541 ttaaggcatt gcaggactat tcagtaattg aaccacaaat cagagagcag gaaaaagatc
601 actgtcttaa acgagccaaa ctcaaggaag aggctcagag gaaacaccaa gaagaggata
661 aaaatgaaga caagagaagt aacgcaggct ttgatggacg ttggtacaca gacatcaatg
721 ctactctttc ctctttagag agcaaagacc acctacaggc accagacaca gaggaacaca
781 acacaaagaa attagacaac agtgaagatg acttggaatt ctggaataag ccctgtttgt
841 ttactcctga atcaagattg gaaactctta gacacatgga aaaacaacgg aagaaacagg
901 aaaaattaag tgaaaaaaag aagaaagtga aaccacccag gactttgatc actgaagatg
961 ggaaagccct aaatgtgaat gagcccaaaa ttgacttctc tttgaaagat aacgaaaagc
1021 agatcatcct ggaccttgct gtctataggt atatggatac ctctttaatc gatgttgatg
1081 tgcaaccaac ttacgtgcga gtaatgatca aaggaaagcc atttcagctt gtccttcctg
1141 cagaagtgaa acccgatagt agttctgcta aaagatctca gacaacgggt catttggtca
1201 tctgcatgcc caaggtagga gaagtaatca caggtggtca gcgagcattc aaatctatga
1261 aaactacctc ggacaggagc agagaacaaa caaatacaag aagcaagcac atggagaaac
1321 tagaagtaga ccctagcaag cactcattcc ctgatgtgac taacatagtt caagagaaaa
1381 aacacacacc cagaagacga cctgaaccca aaattatacc aagtgaggaa gacccaacct
1441 ttgaagacaa ccctgaagtg cctccgctga tttgaaacat ctggctgcgt tgccattggc
1501 tgagacccac caggtccagt tttggttggt gtagagacca tatgcatatt attcctggga
1561 taaacacaga gttatttgtc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaa
//