LOCUS BC047107 3458 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens kelch repeat and BTB (POZ) domain containing 2, mRNA
(cDNA clone MGC:51304 IMAGE:5275217), complete cds.
ACCESSION BC047107
VERSION BC047107.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3458)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3458)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: e Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45120110.
FEATURES Location/Qualifiers
source 1..3458
/db_xref="H-InvDB:HIT000053089"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51304 IMAGE:5275217"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3458
/gene="KBTBD2"
/db_xref="GeneID:25948"
/db_xref="HGNC:HGNC:21751"
CDS 397..2268
/gene="KBTBD2"
/codon_start=1
/product="kelch repeat and BTB (POZ) domain containing 2"
/protein_id="AAH47107.1"
/db_xref="GeneID:25948"
/db_xref="HGNC:HGNC:21751"
/translation="MSTQDERQINTEYAVSLLEQLKLFYEQQLFTDIVLIVEGTEFPC
HKMVLATCSSYFRAMFMSGLSESKQTHVHLRNVDAATLQIIITYAYTGNLAMNDSTVE
QLYETACFLQVEDVLQRCREYLIKKINAENCVRLLSFADLFSCEELKQSAKRMVEHKF
TAVYHQDAFMQLSHDLLIDILSSDNLNVGKEETVREAAMLWLEYNTESRSQYLSSVLS
QIRIDALSEVTQRAWFQGLPPNDKSVVVQGLYKSMRKFFKPRLGMTKEEMMIFIEASS
ENPCSLYSSVCYSPQAEKVYKLCSRPADLHKVGTVVTPDNDIYIAGGQVPLKNTKTNH
SKTSKLQTAFRTVNCFYWFDAQQNTWFPKTPMLFVRIKPSLVCCEGYIYAIGGDSVGG
ELNRRTVERYDTEKDEWTMVSPLPCAWQWSAAVVVHDCIYVMTLNLMYCYFPRSDSWV
EMAMRQTSRSFASAAAFGDKIFYIGGLHIATNSGIRLPSGTVDGSSVTVEIYDVNKNE
WKMAANIPAKRYSDPCVRAVVISNSICVFMRETHLNERAKYVTYQYDLELDRWSLRQH
ISERVLWDLGRDFRCTVGKLYPSCLEESPWKPPTYLFSTDGTEEFELDGEMVALPPV"
BASE COUNT 1012 a 632 c 757 g 1057 t
ORIGIN
1 tgtgtggacg gggccaccgg ctggagcgga tcccacacct ccggaccgag ggacgcggtt
61 actccacagg atccgctgaa cataggatgt tgccacaaaa tctacctcgt gtatttttct
121 ctttcactca tgagctgcac aattgcagat ttgagcacaa tgtctgcaga ctgtgttgaa
181 aaactctgaa gaacctaatt aacacaggat gacctaggag tgattctaag tctgtgtaac
241 aagatattac tcattagtga atgtgtcagt cttggtactg aatgctgcag ataacagcaa
301 gtaggttctc ctttatttct gaagtattca cttgaccttc catcagtaag acggactttt
361 ctaatctgtt cctggagata ttaatggaat acagtcatgt ccactcaaga cgagaggcag
421 atcaatactg aatatgctgt gtcattgttg gaacagttga aactgtttta tgaacagcag
481 ttgtttactg acatagtgtt aattgttgag ggcactgaat tcccttgtca taagatggtt
541 cttgcaacat gtagctctta tttcagggcc atgtttatga gtggactaag tgaaagcaaa
601 caaacccatg tacacctgag gaatgtcgat gctgccacct tacagataat aataacttat
661 gcatacacgg gtaacttggc aatgaatgac agcactgtag aacagcttta tgaaacagct
721 tgcttcctac aggtagaaga tgtgttacaa cgttgtcgag aatatttaat taaaaaaata
781 aatgcagaga attgtgtacg attgttgagt tttgctgatc tcttcagttg tgaggaatta
841 aaacagagtg ctaaaagaat ggtggagcac aagttcactg ctgtgtatca tcaggacgcg
901 ttcatgcagc tgtcacatga cctactgata gatattctca gtagtgacaa tttaaatgta
961 ggaaaggaag aaaccgttcg agaagctgct atgctgtggc tagagtataa cacagaatca
1021 cgatcccagt atttgtcttc tgttcttagc caaatcagaa ttgatgcact ttcagaagtg
1081 acacagagag cttggtttca aggtctgcca cccaatgata agtcagtggt ggttcaaggt
1141 ctgtataagt ccatgcgcaa gtttttcaaa ccaagacttg ggatgactaa agaggaaatg
1201 atgattttca ttgaagcatc ttcagaaaat ccttgtagtc tttactcttc tgtctgttac
1261 agcccccaag cagaaaaagt ttacaagtta tgtagccgac cagctgattt gcataaggtt
1321 gggaccgttg taactcctga taatgatatc tacatagcag ggggtcaagt tcctctgaaa
1381 aacacaaaaa caaatcacag taaaacaagc aaacttcaga ctgccttcag aactgtgaat
1441 tgcttttatt ggtttgatgc acagcaaaat acctggtttc caaagacccc aatgcttttt
1501 gtccgcataa agccatcttt ggtttgctgt gaaggctata tctatgcaat tggaggagat
1561 agcgtaggtg gagaacttaa tcggaggacc gtagaaagat acgacactga gaaagatgag
1621 tggacgatgg taagcccttt accttgtgct tggcaatgga gtgcagcagt tgtggttcat
1681 gactgcattt atgtgatgac actgaacctc atgtactgtt attttccaag gtctgactca
1741 tgggtagaaa tggccatgag acagactagt aggtcctttg cttcagctgc agcttttggt
1801 gataaaattt tctatattgg agggttgcat attgctacca attccggcat aagactcccc
1861 tctggcactg tagatgggtc ttcagtaact gtggaaattt atgatgtgaa taaaaatgag
1921 tggaaaatgg cagccaacat ccctgctaag aggtactctg acccctgtgt tagagctgtt
1981 gtgatctcaa attctatatg tgtgtttatg cgagaaaccc acttaaatga gcgagctaaa
2041 tacgtcacct accaatatga cctggaactt gaccggtggt ctctgcggca gcatatatct
2101 gaacgtgtac tgtgggactt ggggagagat tttcgatgca ctgtggggaa actctatcca
2161 tcctgccttg aagagtctcc atggaaacca ccaacttatc ttttttcaac ggatgggaca
2221 gaagagtttg aactggatgg agaaatggtt gcactaccac ctgtatagtg gggaagttca
2281 gggagtgcac gcctgagtta tgtgctttgt cattttcttt gctaaacaaa agaggctatg
2341 aaagaactaa atatgagtac ataaaattct atctttgata aattttattt ttatgcccta
2401 cttaatattt gcatcagtat aatatatatc agtgagtctt acagaaagat atgcttccat
2461 aatatgaaat agattattca ataattgaga aactttatgt gtaatcatga gagtataaga
2521 atctggatta tctaacattg ttagccctgt gtatgtacag ttcaaaaagt tcatttataa
2581 aagtagtttc ctgttcctag tgtgatgtat cacaaattgt gctgaggtta ttttagtatg
2641 tgtgtttcat tcccgtgctt ctgttctgaa gtcctggaat acagttttca gtgtaattaa
2701 ttcaactgca cttaacacta atgtccgtgt tggtatagaa atgtctaaat cctatactct
2761 agttgaggaa gatcttccat aattttatgg tattacacag ggaaagctat gactgcagga
2821 tcagtctaac tatactatta ggtgcatgta ttctcttttc actaacttat acttgtctat
2881 ctagaataca ggtcttccag tcagctggtc atttaccagg tgtggactta agttgctggg
2941 cttgcagtaa gaattgccag ccactcattg tgcgggtctg cgtggagctt taatcagaaa
3001 aagcctccac tttctgtatt atgttaacat tggctcatgc atataactat ctgctgctga
3061 tgtagttctc catcttcaag atttagattg ggttaaccag gtcattacat cttaatttaa
3121 taacaagcat tactgtagag tgattgtgta tagatctgtt agctgtcagg gtgtgttttt
3181 tttaacctgt tgtgtgcgtg tgggggttag gattagtaag gtgaactgtt caggaattct
3241 ctgcactagc tgtgcagaag agcagataac tagcgctgct ctggcattaa tcccaggaac
3301 cactagcagt agtggggcgc cgccaatcta acatgagcac aggtgcttca tgacaaacat
3361 tactagcatg ttcaactgca ccatgttctg gcactgtatt ttgaatgaca ttaatttatt
3421 aaataaattg tatatattca ataaaaaaaa aaaaaaaa
//