LOCUS BC047030 794 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens uridine phosphorylase 1, mRNA (cDNA clone MGC:54255
IMAGE:5549432), complete cds.
ACCESSION BC047030
VERSION BC047030.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 794)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 794)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (14-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: o Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507838.
FEATURES Location/Qualifiers
source 1..794
/db_xref="H-InvDB:HIT000053072"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54255 IMAGE:5549432"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..794
/gene="UPP1"
/gene_synonym="UDRPASE"
/gene_synonym="UP"
/gene_synonym="UPASE"
/gene_synonym="UPP"
/db_xref="GeneID:7378"
/db_xref="MIM:191730"
CDS 199..720
/gene="UPP1"
/gene_synonym="UDRPASE"
/gene_synonym="UP"
/gene_synonym="UPASE"
/gene_synonym="UPP"
/codon_start=1
/product="UPP1 protein"
/protein_id="AAH47030.1"
/db_xref="GeneID:7378"
/db_xref="MIM:191730"
/translation="MQRKLKVTSLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKTD
LNKKLVQELLLCSAELSEFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAA
YAAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQR
LVSYFIKKKLSKA"
misc_feature 226..630
/gene="UPP1"
/gene_synonym="UDRPASE"
/gene_synonym="UP"
/gene_synonym="UPASE"
/gene_synonym="UPP"
/note="Udp; Region: Uridine phosphorylase [Nucleotide
transport and metabolism]"
/db_xref="CDD:COG2820"
BASE COUNT 173 a 220 c 256 g 145 t
ORIGIN
1 ggatggcgcc gcgggtgtag cggctctctg cgcaggccga gtgggcttgg tgaggtgact
61 cgcggtcgcg ggtgactcgc cggcaggaca ctgcctggaa cgcctggagc gcctcccact
121 gcagacgtct gtccgcctcc agccgctctc ctctgacggg tcctgcctca gttggcggaa
181 tggcggccac gggagccaat gcagagaaag ctgaaagtca caagtctgga gcccggcact
241 gtggtcataa cagagcaggc agtggatacc tgcttcaagg cagagtttga gcagattgtc
301 ctggggaagc gggtcatccg gaaaacggac cttaacaaga agctggtgca ggagctgttg
361 ctgtgttctg cagagctgag cgagttcacc acagtggtgg ggaacaccat gtgcaccttg
421 gacttctatg aagggcaagg ccgtctggat ggggctctct gctcctacac ggagaaggac
481 aagcaggcgt atctggaggc agcctatgca gccggcgtcc gcaatatcga gatggagtcc
541 tcggtgtttg ccgccatgtg cagcgcctgc ggcctccaag cggccgtggt gtgtgtcacc
601 ctcctgaacc gcctggaagg ggaccagatc agcagccctc gcaatgtgct cagcgagtac
661 cagcagaggc cgcagcggct ggtgagctac ttcatcaaga agaaactgag caaggcctga
721 gcgctgccct gcacctccgc agacctgctg tgatgacttg ccattaaaag cattgtccaa
781 aaaaaaaaaa aaaa
//