LOCUS BC047013 1090 bp mRNA linear HUM 28-JUL-2006
DEFINITION Homo sapiens LY6/PLAUR domain containing 6, mRNA (cDNA clone
MGC:52057 IMAGE:5171270), complete cds.
ACCESSION BC047013
VERSION BC047013.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1090)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1090)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-FEB-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: g Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50355992.
FEATURES Location/Qualifiers
source 1..1090
/db_xref="H-InvDB:HIT000053063"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52057 IMAGE:5171270"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1090
/gene="LYPD6"
/gene_synonym="MGC52057"
/db_xref="GeneID:130574"
/db_xref="HGNC:HGNC:28751"
CDS 310..825
/gene="LYPD6"
/gene_synonym="MGC52057"
/codon_start=1
/product="LYPD6 protein"
/protein_id="AAH47013.1"
/db_xref="GeneID:130574"
/db_xref="HGNC:HGNC:28751"
/translation="MEPGPALAWLLLLSLLADCLKAAQSRDFTVKDIIYLHPSTTPYP
GGFKCFTCEKAADNYECNRWAPDIYCPRETRYCYTQHTMEVTGNSISVTKRCVPLEEC
LSTGCRDSEHEGHKVCTSCCEGNICNLPLPRNETDATFATTSPINQTNGHPRCMSVIV
SCLWLWLGLML"
BASE COUNT 364 a 257 c 229 g 240 t
ORIGIN
1 cctttaagga acttacagtc ttatggaaga gacacagatg gaagtgcaca attaccgaat
61 atcatcaaaa agcctgagaa aaagttatgc aaaagctact gtgtgagcac agaggctgta
121 aacctaatcc taagttgcag ggtgagcaac aaggcactat tttggaagca gagaacagcc
181 ctcaccagac acggaatctg ctggtgccct gatcttggaa ttcccaccgt ctagaactgt
241 gcaagttctc tcctgttgcc ctgagtgccc actcccaggc cctctgtatg agtgacactt
301 cagtctgcca tggaacctgg ccctgctctg gcctggctcc tgctcctgag cctgctggcg
361 gattgtctga aagctgctca gtcccgagac ttcacagtga aagacattat ctacctccat
421 ccttcaacca caccatatcc tggtggattt aaatgtttca cctgtgaaaa ggcagcagac
481 aattatgagt gcaaccgatg ggctccagac atctactgcc ctcgagagac cagatactgc
541 tacactcagc acacaatgga agtcacagga aacagtatct cagtcaccaa acgctgtgtc
601 ccactggaag agtgcttatc cactggctgc agagactccg agcatgaagg ccacaaggtc
661 tgcacttctt gttgtgaagg aaatatctgt aacttgccac tgccccgaaa tgaaactgat
721 gccacatttg ccacgacgtc acctataaat cagacaaatg ggcacccacg ctgtatgtca
781 gtgatagtgt cctgcttgtg gttgtggtta gggctcatgt tatagtggct cagtggctcc
841 atgtgttaat agcgatccat ggggatctcg atggtccaca gacctgcatg agtcattggc
901 ctgacagtaa ttacacatgt gagacacaac actcttggag gtcatcacag ccaagcattg
961 ccacttacca tgaggaataa atgttgcttc attgtaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1081 aaaaaaaaaa
//