LOCUS BC046186 759 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens ankyrin repeat domain 36, mRNA (cDNA clone
IMAGE:5495637), complete cds.
ACCESSION BC046186
VERSION BC046186.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 759)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 759)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 60302917
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..759
/db_xref="H-InvDB:HIT000053012"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5495637"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..759
/gene="ANKRD36"
/gene_synonym="UNQ2430"
/db_xref="GeneID:375248"
/db_xref="HGNC:HGNC:24079"
CDS 124..615
/gene="ANKRD36"
/gene_synonym="UNQ2430"
/codon_start=1
/product="ankyrin repeat domain 36"
/protein_id="AAH46186.1"
/db_xref="GeneID:375248"
/db_xref="HGNC:HGNC:24079"
/translation="MEDGKRERWPTLMERLCSDGFAFPQYPIKPYHLKRIHRAVLHGN
LEKLKYLLLTYYDANKRDRKERTALHLACATGQPEMVHLLVSRRCELNLCDREDRTPL
IKAVQLRQEACATLLLQNGANPNITDFFGRTALHYAVYNEDTSMIEKLLSHGTNIEEC
SKV"
BASE COUNT 230 a 165 c 178 g 186 t
ORIGIN
1 gcgctgagag tctgtgcgga ggtccgtgga cagactgctt tgctcgttgt tgctcttcgg
61 aggcggcgat ccccgaaggc gagctgaaat acggctgcag gctacaattt gcagccgacg
121 attatggaag acggcaagcg ggagaggtgg cccaccctca tggagcgctt gtgctcggat
181 ggcttcgcat ttccccaata ccccattaaa ccgtatcatc tgaagaggat ccacagagct
241 gtcttacatg gtaatctaga gaaactgaag taccttctgc tcacgtatta tgacgccaat
301 aagagagaca ggaaggaaag gaccgcccta catttggcct gtgccactgg ccaaccggaa
361 atggtacatc tcctggtgtc cagaagatgt gagcttaacc tctgcgaccg tgaagacagg
421 acacctctga tcaaggctgt acaactgagg caggaggctt gtgcaactct tctgctgcaa
481 aatggcgcca atccaaatat tacggatttc tttggaagga ctgctctgca ctacgctgtg
541 tataatgaag atacatccat gatagaaaaa cttctttcac atggtacaaa tattgaagaa
601 tgcagcaagg tataggtcaa ccaatgttat tttcaaacta tctgaaatga atttatttta
661 acattgacac atgtaagggt caatttttca tatttggaag ctcaaacatt ccttgaatga
721 aaatattttg aaatgccaaa aaaaaaaaaa aaaaaaaaa
//