LOCUS BC046177 1218 bp mRNA linear HUM 04-NOV-2003
DEFINITION Homo sapiens GCN1 general control of amino-acid synthesis 1-like 1
(yeast), mRNA (cDNA clone IMAGE:4441875), partial cds.
ACCESSION BC046177
VERSION BC046177.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1218)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1218)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: b Column: 17.
FEATURES Location/Qualifiers
source 1..1218
/db_xref="H-InvDB:HIT000098303"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4441875"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1218
/gene="GCN1L1"
/gene_synonym="GCN1L"
/gene_synonym="KIAA0219"
/db_xref="GeneID:10985"
/db_xref="MIM:605614"
CDS <1..572
/gene="GCN1L1"
/gene_synonym="GCN1L"
/gene_synonym="KIAA0219"
/codon_start=3
/product="GCN1L1 protein"
/protein_id="AAH46177.1"
/db_xref="GeneID:10985"
/db_xref="MIM:605614"
/translation="HGRSLALSVAVNVAPGRLCAGRYSSDVQEMILSSATADRIPIAV
SGVRGMGFLMRHHIETGGGQLPAKLSSLFVKCLQNPSSDIRLVAEKMIWWANKDPLPP
LDPQAIKPILKALLDNTKDKNTVVRAYSDQAIVNLLKMRQGEEVFQSLSKILDVASLE
VLNEVNRRSLKKLASQADSTEQVDDTILT"
BASE COUNT 309 a 298 c 324 g 287 t
ORIGIN
1 ggcacgggcg gagcctggca ctttccgtgg ctgtgaatgt ggctcctggc agactttgtg
61 ccggcagata tagcagtgat gttcaggaaa tgatcctgag cagtgccacg gcggacagga
121 tccccattgc ggtgagcggg gtccggggca tgggctttct catgagacac cacatcgaga
181 caggcggagg gcagttgccg gccaaacttt ccagcctgtt cgttaagtgt ctgcagaacc
241 catccagcga catcaggctg gtggctgaga agatgatctg gtgggcaaat aaggacccac
301 tgcctcccct ggacccccag gccatcaagc ccatcctgaa ggctcttctt gacaacacca
361 aggataagaa caccgtggtc agggcctaca gcgaccaggc aattgtcaac ctcctcaaga
421 tgcggcaggg tgaagaggtg tttcagtccc tctccaagat cctggatgtg gccagtttgg
481 aggtgctgaa cgaggttaac cgaaggtccc tgaagaagct ggccagccag gccgactcca
541 cggagcaggt ggacgacacc atcctgacat gagaggcctg ggccagcagc agcattgccg
601 ctccacatct ttgctcaatg ttttcatttt tgaaaataca tttgttccaa tggggagctt
661 ggaagatggc gttcccagaa agtattttaa tatcaataga ccacagccaa agccttaaat
721 caaacccaca cacaactgaa aattgcctcc tccatctctc accttttcct gtggagaaga
781 gaaggaaaag cacacgcatg cgcctcagca aatggcagcc caggagctgt ttgtccagtt
841 tagcatggct aggtctggaa ctataatagc agggtcagac tgtgggttcc tcttctcctg
901 tgcttgagct ctggtttgag agctggcgct accaaccttt ttcctatatc ccgagtgggg
961 cacagacggt ggatctctgc ccagtgtggt gtgtctggct tggcttttca atattgtgag
1021 gtctgaatgg atctgatccc tgtcagatga aaatgattca cagctctggc agttcccaag
1081 tctggggagg ggtataggtt tgaaaggctg tttgaaagag gaatgtttaa taaaggcttt
1141 gatttaatct tgatataaac agatttttaa aaatctccac ccattaaaca tgaagcttcc
1201 tgcaaaaaaa aaaaaaaa
//