LOCUS BC046150 2333 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens tumor protein p53 binding protein, 2, mRNA (cDNA clone
IMAGE:5785307), partial cds.
ACCESSION BC046150
VERSION BC046150.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2333)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2333)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: k Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4885642.
FEATURES Location/Qualifiers
source 1..2333
/db_xref="H-InvDB:HIT000098285"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5785307"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2333
/gene="TP53BP2"
/gene_synonym="53BP2"
/gene_synonym="ASPP2"
/gene_synonym="BBP"
/gene_synonym="p53BP2"
/gene_synonym="PPP1R13A"
/db_xref="GeneID:7159"
/db_xref="HGNC:HGNC:12000"
/db_xref="MIM:602143"
CDS 236..>2333
/gene="TP53BP2"
/gene_synonym="53BP2"
/gene_synonym="ASPP2"
/gene_synonym="BBP"
/gene_synonym="p53BP2"
/gene_synonym="PPP1R13A"
/codon_start=1
/product="TP53BP2 protein"
/protein_id="AAH46150.2"
/db_xref="GeneID:7159"
/db_xref="HGNC:HGNC:12000"
/db_xref="MIM:602143"
/translation="MRFGSKMMPMFLTVYLSNNEQHFTEVPVTPETICRDVVDLCKEP
GESDCHLAEVWCGSERPVADNERMFDVLQRFGSQRNEVRFFLRHERPPGRDIVSGPRS
QDPSLKRNGVKVPGEYRRKENGVNSPRMDLTLAELQEMASRQQQQIEAQQQLLATKEQ
RLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQEAKLKKVRALKGHVEQKRLSNGKLVE
EIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQSAVAELDRLYKEL
QLRNKLNQEQNAKLQQQRECLNKRNSEVAVMDKRVNELRDRLWKKKAALQQKENLPVS
SDGNLPQQAASAPSRVAAVGPYIQSSTMPRMPSRPELLVKPALPDGSLVIQASEGPMK
IQTLPNMRSGAASQTKGSKIHPVGPDWSPSNADLFPSQGSASVPQSTGNALDQVDDGE
VPLREKEKKVRPFSMFDAVDQSNAPPSFGTLRKNQSSEDILRDAQVANKNVAKVPPPV
PTKPKQINLPYFGQTNQPPSDIKPDGSSQQLSTVVPSMGTKPKPAGQQPRVLLSPSIP
SVGQDQTLSPGSKQESPPAAAVRPFTPQPSKDTLLPPFRKPQTVAASSIYSMYTQQQA
PGKNFQQAVQSALTKTHTRGPHFSSVYGKPVIAAAQNQQQHPENIYSNSQGKPGSPEP
ETEPVSSVQENHEKKKK"
BASE COUNT 668 a 593 c 594 g 478 t
ORIGIN
1 cacgagcgtc gaagagacaa agccgcgtca gggggcccgg ccggggcggg ggagcccggg
61 gcttgttggt gccccagccc gcgcggaggg cccttcggac ccgcgcgccg ccgctgccgc
121 cgccgccgcc tcgcaacagg tccgggcggc ctcgctctcc gctcccctcc cccgcatccg
181 cgaccctccg gggcacctca gctcggccgg ggccgcagtc tggccacccg cttccatgcg
241 gttcgggtcc aagatgatgc cgatgtttct taccgtgtat ctcagtaaca atgagcagca
301 cttcacagaa gttccagtta ctccagaaac aatatgcaga gacgtggtgg atctgtgcaa
361 agaacccggc gagagtgatt gccatttggc tgaagtgtgg tgtggctctg aacgtccagt
421 tgcggataat gagcgaatgt ttgatgttct tcaacgattt ggaagtcaga ggaacgaagt
481 tcgcttcttc cttcgtcatg aacgcccccc tggcagggac attgtgagtg gaccaagatc
541 tcaggatcca agtttaaaaa gaaatggtgt aaaagttcct ggtgaatatc gaagaaagga
601 gaacggtgtt aatagtccta ggatggatct gactcttgct gaacttcagg aaatggcatc
661 tcgccagcag caacagattg aagcccagca acaattgctg gcaactaagg aacagcgctt
721 aaagtttttg aaacaacaag atcagcgaca acagcaacaa gttgctgagc aggagaaact
781 taaaaggcta aaagaaatag ctgagaatca ggaagctaag ctaaaaaaag tgagagcact
841 taaaggccac gtggaacaga agagactaag caatgggaaa cttgtggagg aaattgaaca
901 gatgaataat ttgttccagc aaaaacagag ggagctcgtc ctggctgtgt caaaagtaga
961 agaactgacc aggcagctag agatgctcaa gaacggcagg atcgacagcc accatgacaa
1021 tcagtctgca gtggctgagc ttgatcgcct ctataaggag ctgcagctaa gaaacaaatt
1081 gaatcaagag cagaatgcca agctacaaca acagagggag tgtttgaata agcgtaattc
1141 agaagtggca gtcatggata agcgtgttaa tgagctgagg gaccggctgt ggaagaagaa
1201 ggcagctcta cagcaaaaag aaaatctacc agtttcatct gatggaaatc ttccccagca
1261 agccgcgtca gccccaagcc gtgtggctgc agtaggtccc tatatccagt cgtctactat
1321 gcctcggatg ccctcaaggc ctgaattgct ggtgaagcca gccctgccgg atggttcctt
1381 ggtcattcag gcttcagagg ggccgatgaa aatacagaca ctgcccaaca tgagatctgg
1441 ggctgcttca caaactaaag gctctaaaat ccatccagtt ggccctgatt ggagtccttc
1501 aaatgcagat cttttcccaa gccaaggctc tgcttctgta cctcaaagca ctgggaatgc
1561 tctggatcaa gttgatgatg gagaggttcc gctgagggag aaagagaaga aagtgcgtcc
1621 gttctcaatg tttgatgcag tagaccagtc caatgcccca ccttcctttg gtactctgag
1681 gaagaaccag agcagtgaag atatcttgcg ggatgctcag gttgcaaata aaaatgtggc
1741 taaagtacca cctcctgttc ctacaaaacc aaaacagatt aatttgcctt attttggaca
1801 aactaatcag ccaccttcag acattaagcc agacggaagt tctcagcagt tgtcaacagt
1861 tgttccgtcc atgggaacta aaccaaaacc agcagggcag cagccgagag tgctgctatc
1921 tcccagcata ccttcggttg gccaagacca gaccctttct ccaggttcta agcaagaaag
1981 tccacctgct gctgccgtcc ggccctttac tccccagcct tccaaagaca ccttacttcc
2041 acccttcaga aaaccccaga ccgtggcagc aagttcaata tattccatgt atacgcaaca
2101 gcaggcgcca ggaaaaaact tccagcaggc tgtgcagagc gcgttgacca agactcatac
2161 cagagggcca cacttttcaa gtgtatatgg taagcctgta attgctgctg cccagaatca
2221 acagcagcac ccagagaaca tttattccaa tagccagggc aagcctggca gtccagaacc
2281 tgaaacagag cctgtttctt cagttcagga gaaccatgaa aaaaaaaaaa aaa
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