LOCUS BC046098 1543 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CBF1 interacting corepressor, mRNA (cDNA clone
MGC:57509 IMAGE:5495320), complete cds.
ACCESSION BC046098
VERSION BC046098.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1543)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1543)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC046098.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: f Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40068058.
FEATURES Location/Qualifiers
source 1..1543
/db_xref="H-InvDB:HIT000052983"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57509 IMAGE:5495320"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1543
/gene="CIR"
/db_xref="GeneID:9541"
/db_xref="MIM:605228"
CDS 45..1397
/gene="CIR"
/codon_start=1
/product="CBF1 interacting corepressor"
/protein_id="AAH46098.1"
/db_xref="GeneID:9541"
/db_xref="MIM:605228"
/translation="MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQ
QYLKEQESYDNRLLMGDERVKNGLNFMYEAPPGAKKENKEKEETEGETEYKFEWQKGA
PREKYAKDDMNIRDQPFGIQVRNVRCIKCHKWGHVNTDRECPLFGLSGINASSVPTDG
SGPSMHPSELIAEMRNSGFALKRNVLGRNLTANDPSQEYVASEGEEDPEVEFLKSLTT
KQKQKLLRKLDRLEKKKKKKDRKKKKFQKSRSKHKKHKSSSSSSSSSSSSSSTETSES
SSESESNNKEKKIQRKKRKKNKCSGHNNSDSEEKDKSKKRKLHEELSSSHHNREKAKE
KPRFLKHESSREDSKWSHSDSDKKSRTHKHSPEKRGSERKEGSSRSHGREERSRRSRS
RSPGSYKQRETRKRAQRNPGEEQSRRNDSRSHGTDLYRGEKMYREHPGGTHTKVTQRE
"
BASE COUNT 619 a 273 c 352 g 299 t
ORIGIN
1 tgctaacaga tctagcccct gctttcccta gttccagttc caagatgggg aaatccttcg
61 ccaacttcat gtgcaagaaa gactttcatc ctgcctccaa atccaatatc aaaaaagtat
121 ggatggcaga acagaaaata tcatatgata agaagaaaca agaagaattg atgcagcaat
181 atcttaaaga acaagaatca tatgataata gattgcttat gggagatgaa cgtgtaaaga
241 atggccttaa tttcatgtat gaagccccac caggagctaa aaaagaaaac aaagagaaag
301 aagaaacaga aggagagacc gaatacaaat ttgaatggca gaaaggagcc ccacgagaaa
361 aatatgccaa agatgacatg aacatcagag atcagccctt tggtattcag gttcgaaatg
421 tgaggtgcat taaatgtcac aaatggggtc atgtcaacac agatcgagaa tgtcctttgt
481 ttggtctttc tggaatcaat gcaagttcgg ttcccactga tggctcaggg ccatcgatgc
541 acccctcgga gctaatagcg gagatgagaa acagtgggtt tgcactgaaa cgaaatgtac
601 tggggagaaa cttgaccgca aatgatccat cacaggagta tgttgcaagt gagggtgaag
661 aagatccaga agttgaattt ttaaagtcac taacaaccaa acaaaaacag aaacttctca
721 ggaaattaga tcgactggag aagaaaaaaa agaaaaaaga tagaaaaaag aaaaagtttc
781 agaagagcag aagtaaacac aaaaaacata agtcctcttc ttcctcatct tcctcctcct
841 cctcctcttc ctctactgag acttcagaaa gcagtagtga gagtgagagt aacaataaag
901 aaaaaaaaat acaaaggaag aaaagaaaga aaaacaagtg ttcagggcat aacaacagtg
961 attctgaaga gaaggacaag tctaagaaga gaaagcttca tgaagaactt tctagcagtc
1021 accataaccg ggaaaaagcc aaggaaaagc ccaggttctt aaaacacgag agttctaggg
1081 aggacagcaa atggagccat tctgattctg acaaaaagtc cagaacccat aaacatagcc
1141 cagagaagag aggctctgaa agaaaggagg ggagcagcag aagccacggc agggaggaaa
1201 ggagccggag aagccggagc agaagtcctg gtagttacaa gcaaagggag acaaggaaac
1261 gggcacagcg aaatcctggt gaagagcaaa gcagaagaaa tgacagcaga agccatggca
1321 cagacttgta tagaggagaa aaaatgtaca gagagcaccc aggaggtaca catactaaag
1381 tgacacaaag agaatgaagc agaagtagag aagaaagact gtatgtgaca attacctggg
1441 aataaaaata tctccacttt tttattgaat acctttagca aggggtaaat tatgtactgt
1501 tgtctttcta ataaaaaagc tcaattttaa aaaaaaaaaa aaa
//