LOCUS BC045754 2684 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens sortilin-related VPS10 domain containing receptor 3,
mRNA (cDNA clone IMAGE:4792838), partial cds.
ACCESSION BC045754
VERSION BC045754.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2684)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2684)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: a Column: 7.
FEATURES Location/Qualifiers
source 1..2684
/db_xref="H-InvDB:HIT000098182"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4792838"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2684
/gene="SORCS3"
/gene_synonym="SORCS"
/db_xref="GeneID:22986"
/db_xref="MIM:606285"
CDS <1..801
/gene="SORCS3"
/gene_synonym="SORCS"
/codon_start=1
/product="SORCS3 protein"
/protein_id="AAH45754.1"
/db_xref="GeneID:22986"
/db_xref="MIM:606285"
/translation="RLITLGSSISFTFLAEGTDTITVQVAAGNALIQDTKEIAVHEYF
QSQLLSFSPNLDYHNPDIPEWRKDIGNVIKRALVKVTSVPEDQILIAVFPGLPTSAEL
FILPPKNLTERRKGNEGDLEQIVETLFNALNQNLVQFELKPGVQVIVYVTQLTLAPLV
DSSAGHGSSAMLMLLSVVFVGLAVFLIYKFKRKIPWINIYAQVQHDKEQEMIGSVSQS
ENAPKITLSDFTEPEELLDKELDTRVIGGIATIANSESTKEIPNCTSV"
BASE COUNT 778 a 538 c 583 g 785 t
ORIGIN
1 cgtctcatca ctttgggcag cagcatttcc ttcacattcc ttgcagaagg aaccgacacc
61 atcacagtcc aggtggctgc tgggaatgcc ctcatccagg acacaaaaga gattgcagtt
121 catgaatatt tccagtccca gcttttatca ttctctccta atctggatta ccacaatcct
181 gacattcctg agtggagaaa agatattggc aatgtcatca agcgagctct ggttaaagta
241 accagtgtcc cagaggacca gatcctcatt gccgtgtttc ctggtctccc cacttcagca
301 gagcttttca ttcttccacc caagaacctg acagagagga ggaaaggcaa tgaaggggac
361 ctggaacaaa ttgtagaaac actgtttaat gctctcaacc aaaatttggt ccagtttgag
421 ctgaagccgg gggtacaagt cattgtgtat gtcacacagc tgacgttagc tccattggtg
481 gactccagtg ctgggcacgg cagctcagcc atgcttatgc tattatcagt ggtatttgtt
541 ggcctggctg tgtttttgat ctacaagttt aaaaggaaaa tcccttggat taacatctat
601 gctcaagtcc aacacgacaa ggagcaggag atgattgggt cagtgagcca aagtgaaaac
661 gcccccaaaa tcacactcag tgactttacg gagcctgagg agctgctgga caaagagctg
721 gacacgcggg tcataggagg cattgccact attgcaaaca gcgaaagcac aaaggagatc
781 cccaactgca ctagtgttta ataccagcaa gccacgtggt caaccacctt tctgactttt
841 tatttttgat gattactatt actattatta tggaaaaatt aaaatgtctt ttttacattt
901 tgtttaccaa gggccccttc ataaatagca ggcaaatgcc tagctttggg agaaaagggc
961 attcttagct gattgaaatg agacaaaggg aataaatggc tgtatttgtg ctaagagcaa
1021 aggatgcatc ttcccacagc ctcctcgctt tactctgcca ttggtagctt aaagactttc
1081 tttttccttg tggtctccct tttttcaaaa ttgaagttgg gttggctctt tgtgaacctc
1141 tcatccccac agcagaatca ccaacactct ccgcttcccc cagcacacac acatacaaca
1201 cagatcattt cccagttaga tccgcaggaa gtaggttggt gggggtggat gtagctgcag
1261 aaagcatgca caactttgtg aaagaggccc tgccttgtgc atgtccatag tgaggctaca
1321 gatggcttat tgtatataat tacaatgtaa atagcttttt atttcctaag aaataattta
1381 atgtttagta aaaaagaaaa cagaaaaaag aaagatgcgt gtgttggctt acgcactggc
1441 cctcagagct gaccaacccg ccaggcctgc tcaatgcatt gggtttggat gctctcctgt
1501 tgtctgtcac acttaactct tgcatctcct tgtccatgcc atagctggtt tctacttatg
1561 tatataaagg ggggtggggg gaggggcttc tctggggcaa ttgataaagg aaggactcta
1621 gtgacatcat agaacatggc agtcgttttt gttccaagaa tgatatgaaa ggtgaagaag
1681 aggcccacta gaggcttcat actgagaccc agatggggga aaacagcttc ctctctaaaa
1741 ggaaaaactt gatatttatc agtctgagaa aatatttttt tctaaagaag gcagtcagtg
1801 gatcttaaaa tgacaatctg tttttaaatt ggattctatg aaaatgcata atgcttatgg
1861 tgaattctca ggctattctg agctcagaaa agtcccctgg gcactaggta aagccaagtg
1921 aatgtctctt ggcatgggag gagttaaaga ggttggaagg gaagaggcat ttgtggaatt
1981 atgagttcat gcaaaactct ccaggccaag taggggtcta gcctttaatg atattagtca
2041 aaggcaattt tagcaaagct gtgctatttg cttgtcagat gtacacaact tccttaaagt
2101 caaatgtctg ccttcagttc ccttaagata gttcttgcct ctggggtgag tggctttcaa
2161 agccttttag cttttccagc acctcagccc cttcacacat ttacacatac caattttttt
2221 caatagggtc acgttaagcc atgctgtaag cattgttttt attttcaggc ttagcctgag
2281 cacacttatt tttgaaaatg atataatgta tatatatggg aggaaaggcc acattttgta
2341 cctgttaatt tttgtgggat gttgttccca ttcttctttg tgagacagag agaatgtgat
2401 atagagaaat ctggctggct acagtgtaga tcagtattag gaatatttct aaagatcctg
2461 cttttttgtt tcaagggtta aatggggcag acaattgcaa tacttgtact aaacactgga
2521 atacaaatgc atgactcata tctatatata cagtatatgt acatatactg ttcttggttt
2581 tattgttcca cttgaatatt tctactgtaa aaaaaagaca gtggttttga aattgttgaa
2641 aataaatgta tttttgtaca tcaaagctaa aaaaaaaaaa aaaa
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