LOCUS BC045189 2971 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens potassium channel tetramerisation domain containing
18, mRNA (cDNA clone MGC:44387 IMAGE:5296647), complete cds.
ACCESSION BC045189
VERSION BC045189.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2971)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2971)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45387952.
FEATURES Location/Qualifiers
source 1..2971
/db_xref="H-InvDB:HIT000098022"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44387 IMAGE:5296647"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2971
/gene="KCTD18"
/gene_synonym="6530404F10Rik"
/gene_synonym="FLJ31322"
/gene_synonym="FLJ37818"
/db_xref="GeneID:130535"
/db_xref="HGNC:HGNC:26446"
CDS 514..1794
/gene="KCTD18"
/gene_synonym="6530404F10Rik"
/gene_synonym="FLJ31322"
/gene_synonym="FLJ37818"
/codon_start=1
/product="potassium channel tetramerisation domain
containing 18"
/protein_id="AAH45189.1"
/db_xref="GeneID:130535"
/db_xref="HGNC:HGNC:26446"
/translation="MEGHKAEEEVLDVLRLNVGGCIYTARRESLCRFKDSMLASMFSG
RFPLKTDESGACVIDRDGRLFKYLLDYLHGEVQIPTDEQTRIALQEEADYFGIPYPYS
LSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRII
GVYATKTDGTDAIEKQLGGRIHSKGIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWE
GKGVSYWRVPHELIECWTLEERPLLGSLRHMAPIRKRRLITFNEADESVNYKTGPKPV
RFLGPSTSTQIKVKNSASVTVSPASAIQTSAGATANRFQSGSRRKAAQRSAPSRATVL
VGTGAPGHPQASPGAASAENGGTHLPPAKVLLSDKKPTPQRVIKLKRTPLCATAPCLP
SPTATRQANSLKPLPGEAARALGVRTENGKNKGN"
BASE COUNT 815 a 626 c 742 g 788 t
ORIGIN
1 agcgggtccg ccccgcggcg tccggcggcc gcgccgaggg tctggcgggc cgcaggtcag
61 tctgggaagc tgccgacccg ccccaccccc ccggtgcgga agagccgggc gcgggatggg
121 ccgcgggccc ggaaggcggc ggggcgccct gaggaagggc acgggccgcg ctggtaacgc
181 gcgcgccccg ggctgcaggc tcgggcttcg ggccgatttg gggtctccag gccgcggaag
241 accgtggcgg ggctttctgg ctccccagct cctcccggct cttcccgctt cggaagagga
301 gtgtgagccc cttgagcgat gtttttcaaa gtggggttcg cgggcagatc ccgacccctc
361 ctcagacttt ctgaggaact gtgtgctgtg gccggagtgt cttcgttttc ccaagcgtcc
421 ctgatggttt tgatgcagag ggagaccaag acatcattgt tttgaagttt ctgaaagtgt
481 tgggaggcaa aaattcaggt gcctggggga gaaatggaag gccacaaggc agaagaagag
541 gtgctagatg ttctccgact gaacgtgggt ggctgtattt acacagcccg gcgggagtcc
601 ttgtgccgct tcaaggactc catgttggca tctatgttca gtggtcgctt tcctctaaaa
661 acagatgagt caggggcttg tgttattgac cgtgatggac gtctatttaa ataccttttg
721 gattaccttc atggagaagt tcagattccc acagatgagc aaacccgcat cgccctacag
781 gaagaggctg attactttgg catcccttat ccatacagcc tgtctgacca tttggccaat
841 gaaatggaga catattcttt aaggtcaaat atagaactta aaaaggcttt aacagacttc
901 tgtgattcat atggcttagt ctgcaataaa ccaacagttt gggttctcca ctatcttaac
961 acatctggtg caagctgtga gagtagaatt attggtgtat atgccacaaa aactgatgga
1021 acagacgcta ttgaaaagca gctgggagga agaattcaca gcaaaggcat ttttaaaaga
1081 gaggcgggaa ataatgttca gtacatttgg agctattatt cagtagcaga gttgaagaaa
1141 atgatggatg cctttgatgc ttgggaagga aaaggtgtta gctactggcg ggtgcctcat
1201 gagctgatag agtgttggac tctagaagaa cggcctttac ttggaagcct gcgtcacatg
1261 gctccaattc gaaagaggcg actgataacg ttcaatgaag cggacgaaag tgtgaactat
1321 aagactggtc ctaagccagt tagatttttg ggcccttcca caagtaccca aattaaagtc
1381 aagaactcgg cctcagtcac ggtgtctcca gccagtgcca tccagacgtc ggctggggcg
1441 acagcaaacc ggtttcaaag tggtagccgc agaaaggcag ctcagcgctc tgcaccttcc
1501 agagccacgg tcctggtggg cacgggggca cctgggcatc ctcaggcttc ccctggggct
1561 gcgagcgctg aaaatggagg cacgcactta cctccagcta aggtgctact ctccgacaag
1621 aagcctacac cccagcgggt gataaagctg aagaggactc cgctgtgcgc caccgcgcct
1681 tgcctgccct cccccacggc cacgaggcag gccaactccc tcaagccgct tcccggcgaa
1741 gctgcccgtg ccttgggagt gcggactgag aacgggaaga acaagggaaa ttgatgaaag
1801 tggtggactt gaaatttccc gttcatctcc caaagctttc aacccattcg acgcaaagaa
1861 gtgacacttt cttaatgcag cagaggggaa gcttaggttt atgttgagga ttctgttcct
1921 ggaattgtgt gagctaggaa tggaggaggg gagactttca atggttaagg ctccatttct
1981 cattttccca acttttatat gattgtctat gggcagtttg aatttctggt tttcaattta
2041 ttttttaatg attaattcgt attaaggcaa caagacagta caacaaataa tctctagaga
2101 ggtccacttt gttgctgaag taaacgttac ttgttgcaac ccgaggatgg gcatgaggtt
2161 tggccttagg tattcctgtc tgggaaaatg gagggggtga tattagtggt tccctgtact
2221 atatcacagc caagagagat tagagagaga aaatgtagat caaggcgagc tgcctacaaa
2281 ttactctgtc tccaaaggca acgtgaaaag aaatgatggg gaggaaaaaa ccccatagat
2341 tgaattagca ctttgactct cacttaattc aacgattttc tttcctagat tggcttttct
2401 tactcttttc tgttagtaga tttatttata aacaccacaa gaagatctct tgggatcaga
2461 attatataat atctttgaag taaattatta aaatatccta tttaatttga atagtgaagt
2521 tttgaaaata ctttgaaaaa gagaagtaaa agtttaactt tttaactaaa gttagtattt
2581 gtttttcaga aatgaccact gaagattcat tctgattata caatatgatt tttatgcata
2641 aaatttccat gtaacttgaa tttaatattt ttaaacagaa tattttgact aatcctctat
2701 tttttcatga ctattcagtt gtgtgtgttt attcgtaaat gttatgtttt gtaattggat
2761 cacatatttc tactttcagt gagagtatgc cttcactatg ttaaaaaata agctcataaa
2821 acagggtact ttttattcaa atgcttatca ttgtactttc attgctttga aagagtaaag
2881 taagtatact caaaacatta cgttttacaa aatcaaataa aacttttcca taaaaaaaaa
2941 aaaaaaaaaa aaaaagaaaa aaaaaaaaaa a
//