LOCUS BC044886 2012 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens stromal antigen 3 opposite strand, mRNA (cDNA clone
MGC:51285 IMAGE:5302712), complete cds.
ACCESSION BC044886
VERSION BC044886.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2012)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2012)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: l Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54020721.
FEATURES Location/Qualifiers
source 1..2012
/db_xref="H-InvDB:HIT000097960"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51285 IMAGE:5302712"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2012
/gene="STAG3OS"
/gene_synonym="GATS"
/db_xref="GeneID:352954"
/db_xref="HGNC:HGNC:29954"
CDS 223..714
/gene="STAG3OS"
/gene_synonym="GATS"
/codon_start=1
/product="STAG3OS protein"
/protein_id="AAH44886.2"
/db_xref="GeneID:352954"
/db_xref="HGNC:HGNC:29954"
/translation="MSCRGRGAGGRWNSTSWSTGCKLPASPRRVSRCSPTGLIKLAFL
FSKTRCKFFSLTETPEDYTIIVDEEGFLELPSSGHLSVADATWLALNVVSGGGSFSSS
QPIGMTKIAKSVIAPLADQNISVFMLSTYQTDFILVLKRDLPFVTHTLSSEFTILWSV
ARL"
BASE COUNT 468 a 563 c 535 g 446 t
ORIGIN
1 agctgctccc cgcgccggca cccgcgcgcc gctgctccgc cggcgctgcc tccctcgacc
61 cgtggctccc cctcgcaact tggcgggcct cctccctttt gtccggcccg gtccggccgc
121 cgccgccccc cgcgcctggc gccgagctcc cgggtccccg ggccggctgt cggtgccggc
181 agggcgcgga gggggcgggg gccgcggctc gtcccccagc ggatgagctg ccgcggacgg
241 ggcgcgggcg gacgatggaa ctccacatcc tggagcaccg gctgcaagtt gccagcgtcg
301 ccaaggagag tatcccgctg ttcacctacg ggcctgatca aacttgcctt cctgttctcc
361 aagaccaggt gcaagttctt cagtctgact gagacaccag aggattacac tatcattgtc
421 gatgaggaag gattcctaga gctgccctcc tcagggcacc tgagtgtggc ggatgccacc
481 tggctggccc tgaacgtggt gtccggcggt ggcagcttct ccagctccca gcctattggc
541 atgaccaaga tcgccaagtc agtcatcgcc ccactggctg accagaacat atccgtgttc
601 atgctgtcca cgtatcagac agacttcatc ctggtgctca agcgggacct gccctttgtc
661 acccacacgt tgtcatcaga gttcaccatc ctgtggtcag tggctagact gtagcagccg
721 agaacctcgg catcaccagt ggcttcgtga agcccaagct ggtccagatg ccggtcatcc
781 acccactgtc cagcccgagc aacaggttct gtgtcaccag cctggacccc gacacgctgc
841 ctgctgttgc cacactcctc atggatgtca tgtcctactt caatgggtga ggatacaact
901 agaagccagc agtctacagg ctggaagaag gccctcacca gaacccaacc cttggacttc
961 agcctccaga actgtgagaa atacatacct gctgtttgtc agacaccagt ctatggaatt
1021 ctgttacagt agcctgaact cagacatagc ccttttccat ttataaggtg gttttacctt
1081 atattttatg taaaaggtcc attttattta tttttgaatt gttgattttt ttttaagaga
1141 cacgtgtttg ctatgttgcc caggctggac tccaactcct ggactattga tcgtcctgtc
1201 tccgcctccc gagttgctgg aactacaggc taacagctct gttttaaaga tgagaaaatg
1261 ggccccacgc agtggctcac acctgtggtc ccagcactta gggaggctga gccaggtgga
1321 gccacttgag gtcaggtgtt cgagattagc ctggccaaca tggcaaaacc ccgtctctac
1381 taaaaataca aaaaaaatta gccgggcatg atggcgcgtg cctgtaatcc cagctacttg
1441 ggagtctgag gcaggagaat tgcttgagcc caggaggcag aggttgcagt gagccgagac
1501 tatgccactg cactccagcc taggtgacag agagagactc tacctcaaaa aataaaaata
1561 attaaaaaat aaagatgaga aaatggaggc tgaggagggg taaaagcgct aacttgacat
1621 ggagttgagg actagcactc atgtcacctc actccaaatg ccaggctttt cccactacac
1681 cagcagcagt tcctcctggg gaaacaggct aggttagaaa gcgagtgagg gaagggacag
1741 ggaggggaag ccctctagta gggagatgga ggataggggg tcatgttttg tggggagaga
1801 cactgaaagg gctgccactt ggactgaatg acctcccacc tccagcatta ggactccttc
1861 caattcctag ggggttcgga ggcaacaata tttatttagg gattgggagc gagagtgcta
1921 ttccaacctt ctttggtatt tgtaatttct tttccttatt ctttaataaa agtagagtcc
1981 aagcaaagtc caaaccaaaa aaaaaaaaaa aa
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