LOCUS BC044588 3626 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens acyl-CoA synthetase short-chain family member 1, mRNA
(cDNA clone MGC:57208 IMAGE:5260496), complete cds.
ACCESSION BC044588
VERSION BC044588.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3626)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3626)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: h Column: 15.
FEATURES Location/Qualifiers
source 1..3626
/db_xref="H-InvDB:HIT000052875"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57208 IMAGE:5260496"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3626
/gene="ACSS1"
/gene_synonym="AceCS2L"
/gene_synonym="MGC33843"
/db_xref="GeneID:84532"
/db_xref="HGNC:HGNC:16091"
CDS 6..2069
/gene="ACSS1"
/gene_synonym="AceCS2L"
/gene_synonym="MGC33843"
/codon_start=1
/product="acyl-CoA synthetase short-chain family member 1"
/protein_id="AAH44588.1"
/db_xref="GeneID:84532"
/db_xref="HGNC:HGNC:16091"
/translation="MAARTLGRGVGRLLGSLRGLSGQPARPPCGVSAPRRAASGPSGS
APAVAAAAAQPGSYPALSAQAAREPAAFWGPLARDTLVWDTPYHTVWDCDFSTGKIGW
FLGGQLNVSVNCLDQHVRKSPESVALIWERDEPGTEVRITYRELLETTCRLANTLKRH
GVHRGDRVAIYMPVSPLAVAAMLACARIGAVHTVIFAGFSAESLAGRINDAKCKVVIT
FNQGLRGGRVVELKKIVDEAVKHCPTVQHVLVAHRTDNKVHMGDLDVPLEQEMAKEDP
VCAPESMGSEDMLFMLYTSGSTGMPKGIVHTQAGYLLYAALTHKLVFDHQPGDIFGCV
ADIGWITGHSYVVYGPLCNGATSVLFESTPVYPNAGRYWETVERLKINQFYGAPTAVR
LLLKYGDAWVKKYDRSSLRTLGSVGEPINCEAWEWLHRVVGDSRCTLVDTWWQTGGIC
IAPRPSEEGAEILPAMAMRPFFGIVPVLMDEKGSVMEGSNVSGALCISQAWPGMARTI
YGDHQRFVDAYFKAYPGYYFTGDGAYRTEGGYYQITGRMDDVINISGHRLGTAEIEDA
IADHPAVPESAVIGYPHDIKGEAAFAFIVVKDSAGDSDVVVQELKSMVATKIAKYAVP
DEILVVKRLPKTRSGKVMRRLLRKIITSEAQELGDTTTLEDPSIIAEILSVYQKCKDK
QAAAK"
BASE COUNT 772 a 932 c 1100 g 822 t
ORIGIN
1 cctggatggc ggcgcgcacc ctgggccgcg gcgtcgggag gctgctgggc agcctgcgag
61 ggctctcggg gcagcccgcg cggccgccgt gcggggtgag cgcgccgcgc agggcggcct
121 cgggaccctc gggcagcgct cccgcagttg cagcagcagc agcacagcca ggctcgtatc
181 ccgcgctgag tgcacaggca gcccgggagc cggccgcctt ctgggggcct ctggcgcggg
241 acactctcgt gtgggacacc ccctaccaca ccgtctggga ctgcgacttc agcactggca
301 agatcggctg gttcctggga ggccagttaa atgtctctgt caactgcttg gaccagcatg
361 ttcggaagtc ccccgagagc gttgctttga tctgggagcg cgatgagcct ggaacggaag
421 tgaggatcac ctacagggaa ctactggaga ccacgtgccg cctggccaac acgctgaaga
481 ggcatggagt ccaccgtggg gaccgtgttg ccatctacat gcccgtgtcc ccattggctg
541 tggcagcaat gctggcctgt gccaggatcg gagctgtcca cacagtcatc tttgctggct
601 tcagtgcgga gtccttggct gggaggatca atgatgccaa gtgcaaggtg gttatcacct
661 tcaaccaagg actccggggt gggcgcgtgg tggagctgaa gaaaatagtg gatgaggctg
721 tgaagcactg ccccaccgtg cagcatgtcc tggtggctca caggacagac aacaaggtcc
781 acatggggga tctggacgtc ccgctggagc aggaaatggc caaggaggac cctgtttgcg
841 ccccagagag catgggcagt gaggacatgc tcttcatgct gtacacctca gggagcaccg
901 gaatgcccaa gggcatcgtc catacccagg caggctacct gctctatgcc gccctgactc
961 acaagcttgt gtttgaccac cagccaggtg acatctttgg ctgtgtggcc gacatcggtt
1021 ggattacagg acacagctac gtggtgtatg ggcctctctg caatggtgcc accagcgtcc
1081 tttttgagag caccccagtt tatcccaatg ctggtcggta ctgggagaca gtagagaggt
1141 tgaagatcaa tcagttctat ggcgccccaa cggctgtccg gctgttgctg aaatacggtg
1201 atgcctgggt gaagaagtat gatcgctcct ccctgcggac cctggggtca gtgggagagc
1261 ccatcaactg tgaggcctgg gagtggcttc acagggtggt gggggacagc aggtgcacgc
1321 tggtggacac ctggtggcag acaggtggca tctgcatcgc accacggccc tcggaagaag
1381 gggcggaaat cctccctgcc atggcgatga ggcccttctt tggcatcgtc cccgtcctca
1441 tggatgagaa gggcagcgtc atggagggca gcaacgtctc cggggccctg tgcatctccc
1501 aggcctggcc gggcatggcc aggaccatct atggcgacca ccagcgattt gtggacgcct
1561 acttcaaggc ctacccaggc tattacttca ctggagacgg ggcttaccga actgagggcg
1621 gctattacca gatcacaggg cggatggatg atgtcatcaa catcagtggc caccggctgg
1681 ggaccgcaga gattgaggac gccatcgccg accaccctgc agtaccagaa agtgctgtca
1741 ttggctaccc ccacgacatc aaaggagaag ctgcctttgc cttcattgtg gtgaaagata
1801 gtgcgggtga ctcagatgtg gtggtgcagg agctcaagtc catggtggcc accaagatcg
1861 ccaaatatgc tgtgcctgat gagatcctgg tggtgaaacg tcttccaaaa accaggtctg
1921 ggaaggtcat gcggcggctc ctgaggaaga tcatcactag tgaggcccag gagctgggag
1981 acactaccac cttggaggac cccagcatca tcgcagagat cctgagtgtc taccagaagt
2041 gcaaggacaa gcaggctgct gctaagtgag ctggcacctt gtggggctct tgggatgggc
2101 gggcacccaa gccctggctt gtccttccca gaaggtaccc ctgaggttgg cgtcttccta
2161 cgtcccagaa gcagccccca ccccacacat gacccacacc gccctcacgt gaagctgggc
2221 tgagagccct ttctcccatc cattggaggt cccaggagtg tcacccatgg agaggctatg
2281 cgacatggct agggctggtt ctgccatctg agtttggttt cctggaatga aaaggcattg
2341 ccatctccat tcctctgccc tcttgagcca gcacaggaag gtgaggccct gggatagcgc
2401 gcctgctcag ataacacaga gctagttagc tagtagcaac cgtgttttct ccagatctgt
2461 ctagatacaa aggtcagaaa tcttattttt atacttttat attgtggaag aacagcatgc
2521 aacactcaca tgtagtgtgt ggatttactt gaacatgttc tttttaacat gtagttatga
2581 aaatctcctt ttttgcctct actggtgagg aaacatgagg atcagaggcc acatttttaa
2641 ttattgttag tgtatttgga agtctgaatt ggagatgttc gtacctctgt ctaaacagtt
2701 cccttgagaa cttccaagcc tccggcatct tttcctggtg agtgtttctc ctgtgcttgg
2761 ttgtgtataa tggagctaac tcctaagcgg tggggtgaat gtggccgcct tagttctgaa
2821 gctactcaag ttatgttctg tttcttcaag ctgtgatcca gaaagatttt tgtgccccca
2881 gatgcctctt gataggagag gcaacatact ccaaatagtt gggttcttca gggaagctat
2941 tagaaactca ggtgacttgt tagagcacta acttggtcag agccaaatcc tggcaaacgc
3001 tgcctgacct tcactctgtg gttggggcag tgagaaccac tgaggtccaa tgatgagact
3061 tggaggtctg gatccagtct ctctttgttt taatgtgact taggtgctgt cgacattagc
3121 aagataatgg aaatcacgac gccagtgggt gcttacctcc ctgctaggca tgcaggggct
3181 ggcggttggc aggggaagga ggcacagtga gccgggtccc ttaggggagg gagagtttgt
3241 cctctttgcc ccacagtcta cccttcaggg ccttgtggca gtgccagtgt tcggggggtg
3301 tctgggccac tgagtaccca ctcggtcgtg gttgtgctgg cctcttgggt gagtgaacct
3361 gtgaagccca ggaggtggtg ttggctgcag ggtacacaaa tactgagtgg tggtcttttg
3421 ttacaggctt agcaacaaag ctgtgccctg ggcatggggg gctgtagtgt agctacagtt
3481 gtgcgtttgt gaaatggctt agctttccat gttgctgaga ggaacctgga catggtcccg
3541 ggcatctgaa tgatctgtag gggagggagt tcaaataaag ctttattttg ttcattttca
3601 aaaaaaagaa aaaaaaaaaa aaaaca
//