LOCUS BC044587 2228 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens LSM12 homolog (S. cerevisiae), mRNA (cDNA clone
MGC:57206 IMAGE:4794614), complete cds.
ACCESSION BC044587
VERSION BC044587.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2228)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2228)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: a Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748746.
FEATURES Location/Qualifiers
source 1..2228
/db_xref="H-InvDB:HIT000052874"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57206 IMAGE:4794614"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2228
/gene="LSM12"
/gene_synonym="FLJ30656"
/db_xref="GeneID:124801"
/db_xref="HGNC:HGNC:26407"
CDS 52..639
/gene="LSM12"
/gene_synonym="FLJ30656"
/codon_start=1
/product="LSM12 homolog (S. cerevisiae)"
/protein_id="AAH44587.1"
/db_xref="GeneID:124801"
/db_xref="HGNC:HGNC:26407"
/translation="MAAPPGEYFSVGSQVSCRTCQEQRLQGEVVAFDYQSKMLALKCP
SSSGKPNHADILLINLQYVSEVEIINDRTETPRPLASLNVSKLASKARTEKEEKLSQA
YAISAGVSLEGQQLFQTIHKTIKDCKWQEKNIVVMEEVVITPPYQVENCKGKEGSALS
HVRKIVEKHFRDVESQKILQRSQAQQPQKEAALSS"
BASE COUNT 594 a 531 c 444 g 659 t
ORIGIN
1 ctttcgcccg ctgctgccgc cgccgccgcc ggccgcggct gcactcccaa gatggcggct
61 cctccgggcg agtacttcag cgttgggagc caggtgtcgt gccggacgtg ccaggagcag
121 cggctgcagg gcgaggtggt agcctttgac taccaatcca aaatgctggc tttaaaatgt
181 ccctcttcca gtggaaagcc caaccatgca gacatcttgc tcataaactt acagtatgtt
241 tcagaagtgg aaataattaa tgaccgaaca gaaacccctc gtcccctagc ttcactcaat
301 gttagtaagc ttgccagcaa agcacggaca gagaaggagg agaagctgag ccaggcctat
361 gcaatcagtg ctggtgtctc tctagagggc cagcagctct tccagaccat tcacaagacc
421 attaaagact gtaaatggca agaaaaaaac atcgtagtca tggaagaagt tgttattaca
481 cccccatatc aagtggaaaa ctgtaaaggc aaagagggga gtgcactgag ccatgtacgc
541 aaaatagttg aaaaacattt tagagacgtg gaaagccaaa agatactgca acgttcacaa
601 gcccagcaac cacagaagga ggctgccctg tcatcctgag tccgtacaca tggaggactc
661 ttccagcatc cagccaagga ggcgctggtg gtggcttcag cggaggcagg ccgggggagg
721 gaagggatcc tatatgtcct gttggctctt aacaaagggt cagcatttcc aaatcttaga
781 cttgaacaaa caaaacaccc aacaaaaaag aacaagagaa taatttaaaa gttgaatcat
841 tacttgacta acagacttcg gtccaccatg tccttttcac agccctcttc tggaacagtc
901 accttgttaa ttttattttt gaaaattatt ttcccactct gccctttact tctgactttc
961 ctttcctagt ttgttcctgc cattctgttt ttataagtgg ctacacttgc cttctgaatg
1021 attgaaagaa acttttacat cttttcttcc aaaataaaag taacaagctg actgtgattc
1081 ttaaattgag accagagcag caaacgtctc actttaaatt tttgttttct tttccttttt
1141 ttttcttttt tctttttttt tttttttttt tgcacagggc atggcttgaa ttagttttat
1201 ttttcttaac tttaaatata tatatgaaaa tatatattaa aatgttctct aaatattttc
1261 tgcttcttgc aggtctcttt ttactagatc atggctgttc ttcccacctc atccctctga
1321 aaataaaaat gtattgccct ccccaccatc catcatagcc aggccactaa cttgacttgg
1381 tgcaagagat tcttgctgcg aactttgtag agccagtgtg cagatagaat ttggctttga
1441 gggttcctga tggcttttta gtctttaact gtgtgtgtac cagtctcaca tttggcccaa
1501 acctcaggat tctccctctg cctgtcttac ttcatggtac tagaagacct tcctcgccac
1561 tctctccaca tgagagagtc agctgccctt tctcctgtgc ctctgcagga agaactctct
1621 tgcatggcac atctcagctc ctcattgagg gatagttttc tttgataaga aacctggagt
1681 ccatttactc tgacctctct ttaaatctat atccagagcc actagcccag gaaaaacttg
1741 ggtgacccgt aatttctctt ctcctgctgt ccttttgctc ttacgcccca ccccaactcc
1801 ccttaaattt tacaggctta tgacagtttg tatgtgctca gccaatgagc agaaaacctg
1861 gaaagaattt ctggacttta gcccaccagt ttgtctggtt gactaacctg ctgagagcta
1921 aaattggcac ccattgcccc gtgccttcag gcagtctcct ggggcagagt atgccaccat
1981 ccgaatatca ggcactgagt gggatgtggg tgatgctcac atgactggct agagctttgg
2041 gggtggggtg ggggttaact actatttttt tggccatgat ctctttcccc ttcctttttt
2101 ttttaattaa gtaaatggat caaattaaat aattcaagcc ctgccttcaa aatgaaattt
2161 ttttttagta ttatttagca aaaacaataa aacccaaatt tttttaacca tcaaaaaaaa
2221 aaaaaaaa
//