LOCUS BC044217 2098 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
(mitochondrial), mRNA (cDNA clone MGC:49912 IMAGE:5744956),
complete cds.
ACCESSION BC044217
VERSION BC044217.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2098)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2098)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: g Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50726975.
FEATURES Location/Qualifiers
source 1..2098
/db_xref="H-InvDB:HIT000052849"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49912 IMAGE:5744956"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2098
/gene="HMGCS2"
/db_xref="GeneID:3158"
/db_xref="HGNC:HGNC:5008"
/db_xref="MIM:600234"
CDS 42..1568
/gene="HMGCS2"
/codon_start=1
/product="3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
(mitochondrial)"
/protein_id="AAH44217.1"
/db_xref="GeneID:3158"
/db_xref="HGNC:HGNC:5008"
/db_xref="MIM:600234"
/translation="MQRLLTPVKRILQLTRAVQETSLTPARLLPVAHQRFSTASAVPL
AKTDTWPKDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDI
NSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGI
DTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVYPSGNARPTGGAGAVAMLI
GPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKK
IQNQWKQAGSDRPFTLDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKG
LEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLAS
LLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRLA
SRKCVSPEEFTEIMNQREQFYHKVNFSPPGDTNSLFPGTWYLERVDEQHRRKYARRPV
"
BASE COUNT 567 a 530 c 499 g 502 t
ORIGIN
1 tgggtttctg aactgctggg tttctgcttg ctcctctgga gatgcagcgt ctgttgactc
61 cagtgaagcg cattctgcaa ctgacaagag cggtgcagga aacctccctc acacctgctc
121 gcctgctccc agtagcccac caaaggtttt ctacagcctc tgctgtcccc ctggccaaaa
181 cagatacttg gccaaaggac gtgggcatcc tggccctgga ggtctacttc ccagcccaat
241 atgtggacca aactgacctg gagaagtata acaatgtgga agcaggaaag tatacagtgg
301 gcttgggcca gacccgtatg ggcttctgct cagtccaaga ggacatcaac tccctgtgcc
361 tgacggtggt gcaacggctg atggagcgca tacagctccc atgggactct gtgggcaggc
421 tggaagtagg cactgagacc atcattgaca agtccaaagc tgtcaaaaca gtgctcatgg
481 aactcttcca ggattcaggc aatactgata ttgagggcat agataccacc aatgcctgct
541 acggtggtac tgcctccctc ttcaatgctg ccaactggat ggagtccagt tcctgggatg
601 gtcgttatgc catggtggtc tgtggagaca ttgccgtcta tcccagtggt aatgctcgtc
661 ccacaggtgg ggccggagct gtggctatgc tgattgggcc caaggcccct ctggccctgg
721 agcgagggct gaggggaacc catatggaga atgtgtatga cttctacaaa ccaaatttgg
781 cctcggagta cccaatagtg gatgggaagc tttccatcca gtgctacttg cgggccttgg
841 atcgatgtta cacatcatac cgtaaaaaaa tccagaatca gtggaagcaa gctggcagcg
901 atcgaccctt cacccttgac gatttacagt acatgatctt tcatacaccc ttttgcaaga
961 tggtccagaa gtctctggct cgcctgatgt tcaatgactt cctgtcagcc agcagtgaca
1021 cacaaaccag cttatataag gggctggagg ctttcggggg gctaaagctg gaagacacct
1081 acaccaacaa ggacctggat aaagcacttc taaaggcctc tcaggacatg ttcgacaaga
1141 aaaccaaggc ttccctttac ctctccactc acaatgggaa catgtacacc tcatccctgt
1201 acgggtgcct ggcctcgctt ctgtcccacc actctgccca agaactggct ggctccagga
1261 ttggtgcctt ctcttatggc tctggtttag cagcaagttt cttttcattt cgagtatccc
1321 aggatgctgc tccaggctct cccctggaca agttggtgtc cagcacatca gacctgccaa
1381 aacgcctagc ctcccgaaag tgtgtgtctc ctgaggagtt cacagaaata atgaaccaaa
1441 gagagcaatt ctaccataag gtgaatttct ccccacctgg tgacacaaac agccttttcc
1501 caggtacttg gtacctggag cgagtggacg agcagcatcg ccgaaagtat gcccggcgtc
1561 ccgtctaaag gtgttctgca gatccatgga aagcttcctg ggaaacgtat gctagcagag
1621 cttctccccg tgaatcatat ttttaagatc ccactcttag ctggtaaatg aatttgaatc
1681 gacatagtag ccccataagc atcagccctg tagagtgagg agccatctct agcgggccct
1741 tcattcctct ccatgctgca atcactgtcc tgggcttatg gtgctatgga ctaggggtcc
1801 tttgtgaaag agcaagatgg agcaatggag agaagacctc ttcctgaatc actggactcc
1861 agaaatgtgc atgcagatca gctgttgcct tcaagatcca gataaacttt cctgtcatgt
1921 gttagaactt tattattatt aatattgtta aacttctgtg ctgttcctgt gaatctccaa
1981 attttgtacc ttgttctaag ctaatatata gcaattaaaa agagagaaag aggaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//