LOCUS BC043646 2276 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens profilin 2, mRNA (cDNA clone MGC:43904 IMAGE:5274799),
complete cds.
ACCESSION BC043646
VERSION BC043646.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2276)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2276)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62422565.
FEATURES Location/Qualifiers
source 1..2276
/db_xref="H-InvDB:HIT000097804"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43904 IMAGE:5274799"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2276
/gene="PFN2"
/gene_synonym="D3S1319E"
/gene_synonym="PFL"
/db_xref="GeneID:5217"
/db_xref="HGNC:HGNC:8882"
/db_xref="MIM:176590"
CDS 256..678
/gene="PFN2"
/gene_synonym="D3S1319E"
/gene_synonym="PFL"
/codon_start=1
/product="profilin 2"
/protein_id="AAH43646.1"
/db_xref="GeneID:5217"
/db_xref="HGNC:HGNC:8882"
/db_xref="MIM:176590"
/translation="MAGWQSYVDNLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSIT
PIEIDMIVGKDREGFFTNGLTLGAKKCSVIRDSLYVDGDCTMDIRTKSQGGEPTYNVA
VGRAGRVLVFVMGKEGVHGGGLNKKAYSMAKYLRDSGF"
BASE COUNT 554 a 516 c 516 g 690 t
ORIGIN
1 agcgggctgg tttgtcagcc ccgcggctgc gggcggccgg gcggccgagc gcgctctgag
61 gttcgtccct catcgctgaa cccgcgtcct cccgccgcag ctcctcgggg aggggggcgg
121 tcggtgcctg cgcagagccg cctcctcccc gcccccgccc cgcctccccc cgcgccgccg
181 ccgcccgcta ccgccgccgc cgccgctgcg cctgctgctc ctcgccgtcc gcgctgcagt
241 gcgaagggct cgaagatggc cggttggcag agctacgtgg ataacctgat gtgcgatggc
301 tgctgccagg aggccgccat tgtcggctac tgcgacgcca aatacgtctg ggcagccacg
361 gccgggggcg tctttcagag cattacgcca atagaaatag atatgattgt aggaaaagac
421 cgggaaggtt tctttaccaa cggtttgact cttggcgcga agaaatgctc agtgatcaga
481 gatagtctat acgtcgatgg tgactgcaca atggacatcc ggacaaagag tcaaggtggg
541 gagccaacat acaatgtggc tgtcggcaga gctggtagag tcttggtctt tgtaatggga
601 aaagaagggg tccatggagg cggattgaat aagaaggcat actcaatggc aaaatacttg
661 agagactctg ggttctagct gctaggcaga ctgttaagta ttaggggaaa attgctctta
721 aactttccta gctataagct taagtcttaa ttctggaaat tttattagca atgcagggtg
781 atggggtatg aacctgtgtc tcctttgtat ccctctgttg gtggggaaag gtgtctttct
841 ttctgccctc cccccccaaa ataattctgt tcacttttgt tttgtttcct tgtgtactcc
901 agcattggtt atagtcatgg gaaaggaagg tgtccacgga ggcacactta acaagaaagc
961 atatgaactc gctttatacc tgaggaggtc tgatgtgtaa gcagcctctc cccatctacc
1021 tagcaactgt cttcatcaac aaccctaatt atggtcacaa tgctaccaaa ctgtagatgg
1081 tagctaattt ttctttacct attttctaat gtcatgattc ctgtttgccc aatggatcat
1141 ttgtatgtta accactgtat gtaaccaacc cttatctggc aacataattg cagcacaata
1201 atgatttgca tgataccttg aaattggggg gagggggcat gccaagttgg gcatcacttt
1261 gtcttagcaa ttaatgggat attgattact aaaataagtt aatattaagc aaggtgccgg
1321 ttgtacaatc tctgatcagt gtcttttcag cactttgagc atttacttgg ctcatttagt
1381 cttccttttg tagcgcatgg ttgggaggaa aaagtgcatg catcattcct tcactcttct
1441 ctttttcccg ccccccccct cccttcgcac ataggcattt ggtttgcttc catctttttt
1501 tatgcagtgc ctgttttttt ttaaccaatt aaaatccctt ttgttgatga gctattgaga
1561 gctgcagtag tttgctttta gtattgttgt tgcacttgag cagagacaaa cctttattca
1621 tagtgtctac aggacatatg aagagtgcaa tggcaaaaca agagcaaaaa gcacttcctc
1681 ccatgacctt acagtaacca tactgattga atccccaggg acattccatc attgcaatag
1741 ctcagatttt tcttcctttt tctttgcaca ccagctctac tctttagtaa aattgtaaaa
1801 ggctgccatt atggacatta ggtatcccaa cataaccatc tggagtgtgt ccagtttgtt
1861 cttcatagga ccaattttta tttgcagctt gagtttttat atgaagttgc attattgtgg
1921 acttggctgt cttgtgatga atttttttca tatgtattct gtgccatact attgttaaaa
1981 tgaactgttg ctattgtgag atggatttta actgacctat taagggtttc tttcgaatgg
2041 cactacttta gggacattct agtatttgct tctattgttt gggccttgtg gataatgtac
2101 agatttaaaa acaaatcttg ttgctgattt gtccatttct ttccctgcac tttgttacat
2161 ctgggataca gtctaactca tctgatttaa tatgcattta aaaaaatgcc ataactatta
2221 aacaccttgt ttacagacag atgaaataaa tttattccaa ccaaaaaaaa aaaaaa
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