LOCUS BC043641 2974 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens STE20-related kinase adaptor alpha, mRNA (cDNA clone
MGC:10181 IMAGE:3908187), complete cds.
ACCESSION BC043641
VERSION BC043641.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2974)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2974)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: c Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51242956.
FEATURES Location/Qualifiers
source 1..2974
/db_xref="H-InvDB:HIT000052843"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10181 IMAGE:3908187"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2974
/gene="STRADA"
/gene_synonym="LYK5"
/gene_synonym="NY-BR-96"
/gene_synonym="PMSE"
/gene_synonym="Stlk"
/gene_synonym="STRAD"
/db_xref="GeneID:92335"
/db_xref="HGNC:HGNC:30172"
/db_xref="MIM:608626"
CDS 211..915
/gene="STRADA"
/gene_synonym="LYK5"
/gene_synonym="NY-BR-96"
/gene_synonym="PMSE"
/gene_synonym="Stlk"
/gene_synonym="STRAD"
/codon_start=1
/product="STRADA protein"
/protein_id="AAH43641.1"
/db_xref="GeneID:92335"
/db_xref="HGNC:HGNC:30172"
/db_xref="MIM:608626"
/translation="MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRI
NLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC
THFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL
SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQGYDAKSDIYSVGITACELANGHVPF
KDMPATQGEDSTVKGI"
BASE COUNT 678 a 843 c 754 g 699 t
ORIGIN
1 gcttgctaac tccaggaaca ggtttaagtt tttgaaactg aagtaggtct acacagtagg
61 aactcatgtc atttcttgta agtaaaccag agcgaatcag gcggtgggtc tcggaaaagt
121 tcattgttga gggcttaaga gatttggaac tatttggaga ccaatgatgc gagctcagag
181 tcaatagcat ccttctctaa acaggaggtc atgagtagct ttctgccaga gggagggtgt
241 tacgagctgc tcactgtgat aggcaaagga tttgaggacc tgatgactgt gaatctagca
301 aggtacaaac caacaggaga gtacgtgact gtacggagga ttaacctaga agcttgttcc
361 aatgagatgg taacattctt gcagggcgag ctgcatgtct ccaaactctt caaccatccc
421 aatatcgtgc catatcgagc cacttttatt gcagacaatg agctgtgggt tgtcacatca
481 ttcatggcat acggttctgc aaaagatctc atctgtacac acttcatgga tggcatgaat
541 gagctggcga ttgcttacat cctgcagggg gtgctgaagg ccctcgacta catccaccac
601 atgggatatg tacacaggag tgtcaaagcc agccacatcc tgatctctgt ggatgggaag
661 gtctacctgt ctggtttgcg cagcaacctc agcatgataa gccatgggca gcggcagcga
721 gtggtccacg attttcccaa gtacagtgtc aaggttctgc cgtggctcag ccccgaggtc
781 ctccagcagg gttatgatgc caagtctgac atctacagtg tgggaatcac agcctgtgaa
841 ctggccaacg gccatgtccc ctttaaggat atgcctgcca cccagggtga agactctacg
901 gtaaaaggaa tttgatgcct tggaaaggga gagcggaaac tgtgagccct gctttccagc
961 catggcgaaa gcgggtactt ttgtgcaacc cctctccttt cacgttggcc tggctagggc
1021 ggagctgcca cgccagtgac cagcgtttct ttgggaaaat tggacttact ccacttccac
1081 cttttccact cttcaaatga tcacatttgc atattgggaa cagtgtattt gtgaagagac
1141 tctcaggcct tccagggacc acccccccac cacccgctac agcccaggtc ctggttctgt
1201 cctccccaga tgctgctaga gaaactgaac ggcacagtgc cctgcctgtt ggataccagc
1261 accatccccg ctgaggagct gaccatgagc ccttcgcgct cagtggccaa ctctggcctg
1321 agtgacagcc tgaccaccag caccccccgg ccctccaacg gtgactcgcc ctcccacccc
1381 taccaccgaa ccttctcccc ccacttccac cactttgtgg agcagtgcct tcagcgcaac
1441 ccggatgcca ggtatccctg ctggcctggg cctgggcttc gggagagcag agggtgctca
1501 ggagggtaag gccagggtgt gaagggactt acctcccaaa ggttctgcag gggaatctgg
1561 agctacacac aggagggatc agctcctggg tgtgtcagag gccagcctgg ggagctctgg
1621 ccactgcttc ccatgagctg agggagaggg agaggggacc cgaggctgag gcataagtgg
1681 caggatttcg ggaagctggg gacacggcag tgatgctgcg gtctctcctc ccctttccct
1741 ccaggcccag tgccagcacc ctcctgaacc actctttctt caagcaggta tcgtagcccc
1801 ttcgttctgg ttctggttct agttctggtt ctaacaactc acaatccctt tagctttctc
1861 tcccctccct ttgaatgaga gaaactaccc cgcttccgaa gcccctgaaa gacactgctc
1921 cttcctctca tggagttggc tccgacagcc cgtctgccac caggccatgg ttccttgccc
1981 catggtgtcc tgggacccag agcaacagga tctgtcaccc acctctctct tctcccccag
2041 atcaagcgac gtgcctcaga ggctttgccc gaattgcttc gtcctgtcac ccccatcacc
2101 aattttgagg gcagccagtc tcaggaccac agtggaatct ttggcctggt aacaaacctg
2161 gaagagctgg aggtggacga ttgggagttc tgagcctctg caaactgtgc gcattctcca
2221 gccagggatg cagaggccac ccagaggccc ttcctgaggg ccggccacat tcccgccctc
2281 ctgggcagat tgggtagaaa ggacattctt ccaggaaagt tgactgctga ctgattggga
2341 aagaaaatcc tggagagata cttcactgct ccaaggcttt tgagacacaa gggaatctca
2401 acaaccaggg atcaggaggg tccaaagccg acattcccag tcctgtgagc tcaggtgacc
2461 tcctccgcag aagagagatg ctgctctggc cctgggagct gaattccaag cccagggttt
2521 ggctccttaa acccgaggac cgccacctct tcccagtgct tgcgaccagc ctcattctat
2581 ttaactttgc tctcagatgc ctcagatgct ataggtcagt gaaagggcaa gtagtaagct
2641 gcctgcctcc cttccctcag acctctccct cataattcca gagaagggca tttctgtctt
2701 tttaagcaca gactaaggct ggaacagtcc atccttatcc ctcttctggc ttgggccctg
2761 acacctaagt ctttcccacg gtttatgtgt gtgcctcatt cctttcccac caagaatcca
2821 tcttagcgcc tcctgccagc tgccctggtg ctttctccaa gggccatcag tgtcttgcct
2881 agcttgaggg cttaagtcct tatgctgtgt tagtttcgtt gtcagaacaa attaaaattt
2941 tcagagacgc tgctggaaaa aaaaaaaaaa aaaa
//