LOCUS BC043347 2990 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens general transcription factor IIIC, polypeptide 3,
102kDa, mRNA (cDNA clone MGC:49899 IMAGE:5498609), complete cds.
ACCESSION BC043347
VERSION BC043347.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2990)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2990)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: d Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6912397.
FEATURES Location/Qualifiers
source 1..2990
/db_xref="H-InvDB:HIT000052797"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49899 IMAGE:5498609"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2990
/gene="GTF3C3"
/gene_synonym="TFIIIC102"
/gene_synonym="TFiiiC2-102"
/gene_synonym="TFIIICgamma"
/db_xref="GeneID:9330"
/db_xref="HGNC:HGNC:4666"
/db_xref="MIM:604888"
CDS 13..2673
/gene="GTF3C3"
/gene_synonym="TFIIIC102"
/gene_synonym="TFiiiC2-102"
/gene_synonym="TFIIICgamma"
/codon_start=1
/product="general transcription factor IIIC, polypeptide
3, 102kDa"
/protein_id="AAH43347.1"
/db_xref="GeneID:9330"
/db_xref="HGNC:HGNC:4666"
/db_xref="MIM:604888"
/translation="MSGFSPELIDYLEGKISFEEFERRREERKTREKKSLQEKGKLSA
EENPDDSEVPSSSGINSTKSQDKDVSEGETSDGVRKSVHKVFASMLGENEDDEEEEEE
EEEEEEEEETPEQPTAGDVFVLEMVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRF
ARGEREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTE
EWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNVRYLWERSSLYEQMGDHKMAMDGYRR
ILNLLSPSDGERFMQLARDMAKSYYEANDVTSAINIIDEAFSKHQGLVSMEDVNIAAE
LYISNKQYDKALEIITDFSGIVLEKKTSEEGTSEENKAPENVTCTIPDGVPIDITVKL
MVCLVHLNILEPLNPLLTTLVEQNPEDMGDLYLDVAEAFLDVGEYNSALPLLSALVCS
ERYNLAVVWLRHAECLKALGYMERAAESYGKVVDLAPLHLDARISLSTLQQQLGQPEK
ALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMYGYVDTLLTMLAMLLKV
AMNRAQVCLISSSKSGERHLYLIKVSRDKISDSNDQESANCDAKAIFAVLTSVLTKDD
WWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYDDRQKRKELEYFGLSAAILDKNF
RKAYNYIRIMVMENVNKPQLWNIFNQVTMHSQDVRHHRFCLRLMLKNPENHALCVLNG
HNAFVSGSFKHALGQYVQAFRTHPDEPLYSFCIGLTFIHMASQKYVLRRHALIVQGFS
FLNRYLSLRGPCQESFYNLGRGLHQLGLIHLAIHYYQKALELPPLVVEGIELDQLDLR
RDIAYNLSLIYQSSGNTGMAQTLLYTYCSI"
BASE COUNT 911 a 582 c 658 g 839 t
ORIGIN
1 gaccctgtaa acatgtcagg gttcagtccg gaactcatcg actacttgga agggaaaatc
61 tcctttgagg agttcgaacg gcggagagaa gagagaaaaa cccgcgagaa gaaaagtctt
121 caggaaaaag gcaagttatc agctgaagaa aatcccgatg actctgaagt tccatcatca
181 tcaggaatta actctaccaa atcccaagac aaagatgtca gtgaaggaga aacatcagat
241 ggagtgagga agtcagttca caaggtcttt gcttccatgc ttggagagaa tgaagatgat
301 gaggaggaag aggaagaaga ggaggaggag gaggaggagg aagaaacacc tgagcaaccc
361 actgcgggcg atgtatttgt attggagatg gttctcaatc gtgaaaccaa gaaaatgatg
421 aaagagaaaa ggcctcggag taaacttccc agagctctga gaggtctcat gggtgaagcc
481 aacattcgtt ttgctcgagg agaacgtgaa gaggcgatat tgatgtgcat ggaaatcata
541 agacaagctc ctctggctta tgagccattc tctactctag ccatgatata tgaggaccaa
601 ggtgacatgg aaaaatcatt gcagtttgag ttgattgctg cgcatttaaa tcccagtgac
661 acagaagaat gggttagact ggcagaaatg tctctggaac aagacaatat taagcaggct
721 attttttgct atacaaaagc tcttaaatat gaacctacta atgtccgtta tctgtgggag
781 cgatcaagcc tttatgaaca gatgggtgat cataaaatgg ccatggatgg ttataggcgt
841 attttaaacc ttttgtctcc atctgatggc gaacgtttta tgcagctggc tagagatatg
901 gcaaagagtt actatgaagc caatgatgtt acttctgcta ttaacataat tgatgaagct
961 ttctcaaaac accagggcct agtctccatg gaagatgtta acatagcagc tgaactatat
1021 atttctaaca aacagtatga caaagctttg gagataatta cagatttttc tggaattgtg
1081 ctggaaaaaa aaacttcaga agaaggcacc tcagaagaga ataaagctcc tgagaatgtt
1141 acctgcacta tacctgatgg cgtgccaata gatatcacag tgaagttgat ggtctgcctt
1201 gtacatctca acattcttga accacttaat cctctcttga caacactagt agaacagaat
1261 cctgaagata tgggagacct atacctagat gttgctgaag cttttctgga tgttggtgaa
1321 tataattctg cacttcccct cctcagtgct cttgtttgct ctgaaagata caaccttgca
1381 gtagtttggc ttcgtcatgc agaatgttta aaggccttag gctatatgga gcgagctgct
1441 gaaagctatg gcaaggtggt tgatctggcc ccactccatt tggatgcaag gatttcactt
1501 tctacccttc agcagcagct gggccagcct gagaaagctc tggaagctct ggaaccaatg
1561 tatgatccag atactttagc acaggatgca aatgctgcac agcaggaact gaagttattg
1621 cttcatcgtt ctactctgtt gttttcacaa ggcaaaatgt atggttatgt ggatacctta
1681 cttactatgt tagccatgct tttaaaggta gcaatgaatc gagcccaagt ttgtttgata
1741 tccagttcca agtctggaga gaggcatctt tatcttatta aagtatcgag agacaaaata
1801 tcagacagca atgaccaaga gtcagcaaat tgtgatgcaa aagcaatatt tgctgtgctc
1861 acaagcgtct tgacaaagga tgactggtgg aatcttctgt tgaaggccat atactcctta
1921 tgtgacctat cccgatttca agaggctgag ttgcttgtag attcctcatt ggaatattac
1981 tcattttatg atgacaggca aaaacgcaaa gaactagaat actttggtct gtctgctgca
2041 attctggaca aaaatttcag aaaggcatac aactatatca ggataatggt aatggaaaat
2101 gtcaataaac cccagctctg gaacattttc aatcaagtta ccatgcactc ccaagatgta
2161 cgacatcatc gcttctgtct ccgtttgatg ctgaaaaacc cagaaaatca tgccctatgt
2221 gtcttaaatg gacacaatgc atttgtatct ggtagtttta agcatgcgct tggacagtat
2281 gtgcaagcct ttcgcactca ccctgacgaa cctctctata gcttctgtat aggcctaacc
2341 tttattcata tggcatctca gaagtatgtg ttacggagac atgctcttat tgtacagggc
2401 ttttcctttc ttaatcgata cctcagttta cgtgggccct gccaggaatc attctacaat
2461 ttgggccgtg gccttcatca gttggggctg attcatcttg caatccacta ttatcagaag
2521 gccctggagc tccctccact tgtggtagag ggtatagaac ttgaccagtt agacttacga
2581 agagatattg cctacaactt gtctctcatc tatcagagca gtgggaatac cggaatggct
2641 caaacgcttt tgtataccta ttgttctata taaagcaccg caactgagaa cagagcaatg
2701 gcagctgctg tgtgaggacc agtgtcttct gtctcagggc ttattatttg taactccaaa
2761 atagaaatga caatttcaga attacctaac aaacagtgta tttattttta atatgtgata
2821 atgatcttgt ggtatatatg caaaattatt cctacaaaaa tttgtatatt ggtctgtcat
2881 tttcctttca cattctatag tgaattgttc ccaatgttga aatggacgtg taagcctttg
2941 agctagcttg gagtcgaata cactattttt cactcaaaaa aaaaaaaaaa
//