LOCUS BC043344 1440 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 29, mRNA (cDNA clone
MGC:49882 IMAGE:5505030), complete cds.
ACCESSION BC043344
VERSION BC043344.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1440)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1440)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: d Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922912.
FEATURES Location/Qualifiers
source 1..1440
/db_xref="H-InvDB:HIT000052795"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:49882 IMAGE:5505030"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1440
/gene="C20orf29"
/gene_synonym="FLJ11168"
/db_xref="GeneID:55317"
/db_xref="HGNC:HGNC:15875"
CDS 189..791
/gene="C20orf29"
/gene_synonym="FLJ11168"
/codon_start=1
/product="chromosome 20 open reading frame 29"
/protein_id="AAH43344.1"
/db_xref="GeneID:55317"
/db_xref="HGNC:HGNC:15875"
/translation="MVHAFLIHTLRAPNTEDTGLCRVLYSCVFGAEKSPDDPRPHGAE
RDRLLRKEQILAVARQVESMCRLQQQASGRPPMDLQPQSSDEQVPLHEAPRGAFRLAA
ENPFQEPRTVVWLGVLSLGFALVLDAHENLLLAEGTLRLLTRLLLDHLRLLAPSTSLL
LRADRIEGILTRFLPHGQLLFLNDQFVQGLEKEFSAAWPR"
BASE COUNT 295 a 439 c 430 g 276 t
ORIGIN
1 gtggcagtcc gcgggcccgg acggaaggct gaggcgacgc ctcgacgaca gcggaccgga
61 gctgcagggg caacacattc agggcggggt gccccattta ggcctggctg accggagtaa
121 gaaactacaa cccccgaagt gccttgcgcc tcaaggttac ggaggcagtg accacccacc
181 ctggagccat ggtccacgcc ttcctcattc acaccttgag ggccccgaat actgaggaca
241 cgggcctttg ccgagtgctg tactcctgcg tcttcggtgc tgagaagtca cctgatgacc
301 cacggccgca tggtgccgag agggacaggc ttctccggaa ggaacagatt ttagctgtgg
361 ccaggcaggt agagtcaatg tgtcggctgc agcagcaggc atctggccgg ccccccatgg
421 acctgcagcc gcaatcctca gatgagcaag tgccgctgca cgaggcccca cgtggggctt
481 tccgcctggc agcagagaac cctttccagg agccacggac ggtggtgtgg ctgggcgtgc
541 tctcgttagg ctttgccctg gtgctggatg cccatgagaa cctgctactg gctgagggca
601 cgctccggct gctgacacgc ctcctccttg accacctccg gctgctggcg cccagcacca
661 gccttctgct gcgggctgac cgcattgagg gcatcctcac ccgcttcctg ccacatggtc
721 agctgctttt cctcaacgac cagtttgtcc aaggcctgga gaaggaattc agtgccgctt
781 ggccccgctg attcctcgtt gggatggtgc ttctgagggc aggcagaggg tagacacaca
841 gccagatgaa gcttggcatc tccctcctac ccagcagctc tgatgtgctg ctataccagg
901 acaagtgggt gacacaagcc tgcagaaagg gggctgggca gagggtggag gaggtcctgc
961 ctgtcctcag gttagtggaa ccacagaact tcctgagcct agagctgctg tgttacttag
1021 accgctgccg tgcggcagcc acgcttgtcc ttgaacccac cttcctccat ccctgccagc
1081 cgatagtgct agggtgagga gctgcctgga gctcaccccg ctcttcttcc aaacccacag
1141 tcaaggccag gcgcggtggc tcacgcctgt aatcccagca ctttgcgggg ctgaggtggt
1201 tggaccacct caggtcggga gttcaagacc agcctggcca acatagtgaa accccatctc
1261 tactaaaaat acaaaaatta gctgggtgta tggcgcccac ctgtaatcct agctgctcag
1321 ggggctgagt catgggaatc acttgaacct gggaggcaga gtttgcagtg agccgagagt
1381 gcgccacttc actccagcct gggcaacaga gtgagactcc atctcaaaaa aaaaaaaaaa
//