LOCUS BC043144 4451 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens regulating synaptic membrane exocytosis 2, mRNA (cDNA
clone MGC:41823 IMAGE:5288275), complete cds.
ACCESSION BC043144
VERSION BC043144.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4451)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4451)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC043144.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: d Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281443.
FEATURES Location/Qualifiers
source 1..4451
/db_xref="H-InvDB:HIT000052774"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41823 IMAGE:5288275"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4451
/gene="RIMS2"
/gene_synonym="KIAA0751"
/gene_synonym="OBOE"
/gene_synonym="RIM2"
/db_xref="GeneID:9699"
/db_xref="HGNC:HGNC:17283"
/db_xref="MIM:606630"
CDS 237..3728
/gene="RIMS2"
/gene_synonym="KIAA0751"
/gene_synonym="OBOE"
/gene_synonym="RIM2"
/codon_start=1
/product="regulating synaptic membrane exocytosis 2"
/protein_id="AAH43144.1"
/db_xref="GeneID:9699"
/db_xref="HGNC:HGNC:17283"
/db_xref="MIM:606630"
/translation="MQFETLRQVCNSVLSHFHGVFSSPPNILQNELFGQTLNNARKRS
PSVSRDQNRRYDQREEREEYSQYATSDTAMPRSPSDYADRRFQHEPQFYEDSDHLSYR
DSNRRSHRHSKEYIVDDEDVESRDEYERQRREEEYQSRYRSDPNLARYPVKPQPYEEQ
MRIHAEVSRARHERRHSDVSLANADLEDSRISMLRMDRPSRQRSISERRAAMENQRSY
SMERTREAQGPSSYAQRTTNHSPPTPRRSPLPIDRPDLRRTDSLRKQHHLDPSSAVRK
TKREKMETMLRNDSLSSDRSESVRPPPPKPHKSKKGGKMRQISLSSSEEELASTPEYT
SCDDVEIESESVSEKGDMDYNWLDHTSWHSSEASPMSLHPVTWQPSKDGDRLIGRILL
NKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVL
EWNGRLLQGATFEEVYNIILESKPEPQVELVVSRPIGDIPRIPDSTHAQLESSSSSFE
SQKMDRPSISVTSPMSPGMLRDVPQFLSGQLSIKLWFDKVGHQLIVTILGAKDLPSRE
DGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT
LWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHDVSSLPLPHPSPYMPRRQL
HGESPTRRLQRSKRISDSEVSDYDCDDGIGVVSDYRHDGRDLQSSTLSVPEQVMSSNH
CSPSGSPHRVDVIGRTRSWSPSVPPPQSRNVEQGLRGTRTMTGHYNTISRMDRHRVMD
DHYSPDRDSHFLTLPRSRYSQTIDHHHRDGRDCEAADRQPYHRSRSTEQRPLLERTTT
RSRSTERPDTNLMRSMPSLMTGRSAPPSPALSRSHPRTGSVQTSPSSTPVAGRRGRQL
PQLPPKGTLDRKAGGKKLRSTVQRSTETGLAVEMRNWMTRQASRESTDGSMNSYSSEG
NLIFPGVRLASDSQFSDFLDGLGPAQLVGRQTLATPAMGDIQVGMMDKKGQLEVEIIR
ARGLVVKPGSKTLPAPYVKVYLLDNGVCIAKKKTKVARKTLEPLYQQLLSFEESPQGK
VLQIIVWGDYGRMDHKSFMGVAQILLDELELSNMVIGWFKLFPPSSLVDPTLAPLTRR
ASQSSLESSTGPSYSRS"
BASE COUNT 1441 a 928 c 1009 g 1073 t
ORIGIN
1 acagtcagga gaaagccgaa agctgcacgg gtactgaatc ttctacgact gaattagaag
61 aataatgact gtacaattaa ctatcaacct ctgttcattt aagcacagtt tttacagagc
121 tcaggagaaa tatggaactt gattggcgtg tttttatttg atggtgtcag caaatagatg
181 attttaaaga caggtggtag ggaaaaataa gagaagggga aaaaaaaaga aagaaaatgc
241 aatttgagac attgcgccag gtctgcaatt ctgttttatc tcattttcat ggggtttttt
301 catccccacc aaatatctta caaaatgagc tttttggaca aacactgaac aatgcaagga
361 aaagaagccc atctgtgtcc agagatcaga atagaagata cgaccaaagg gaagaaagag
421 aggaatattc acagtatgct acttcggata ccgcaatgcc tagatctcca tcagattatg
481 ctgataggcg atttcaacat gaacctcagt tttatgaaga ctctgatcat ttaagttata
541 gggactccaa caggagaagt cataggcatt ccaaagaata tattgtagat gatgaggatg
601 tggaaagcag agatgaatac gaaaggcaaa ggagagagga agagtaccag tcacgctacc
661 gaagtgatcc gaatttggcc cgttatccag taaagccaca accctatgaa gaacaaatgc
721 ggatccatgc tgaagtgtcc cgagcacggc atgagagaag gcatagtgat gtttctttgg
781 caaatgctga tctggaagat tccaggattt ctatgctaag gatggatcga ccatcaaggc
841 aaagatctat atcagaacgt agagctgcca tggaaaatca gcgatcttat tcaatggaaa
901 gaactcgaga ggctcaggga ccaagttctt atgcacaaag gaccacaaac catagtcctc
961 ctacccccag gaggagtcca ctacccatag atagaccaga cttgaggcgt actgactcac
1021 tacggaaaca gcaccactta gatcctagct ctgctgtaag aaaaacaaaa cgggaaaaaa
1081 tggaaacaat gttaaggaat gattctctca gttcagaccg gtcagagtca gtgagacctc
1141 caccaccaaa gcctcataaa tcaaagaaag gcggtaaaat gcgccagatt tcgttgagca
1201 gttcagagga ggaattggct tccacgcctg aatatacaag ttgtgatgat gttgagattg
1261 aaagtgagag tgtaagtgaa aaaggagaca tggattacaa ctggttggat catacgtctt
1321 ggcatagcag tgaggcatcc ccaatgtctt tgcaccctgt aacctggcaa ccatctaaag
1381 atggagatcg tttaattggt cgcattttat taaataagcg tctaaaagat ggaagtgtac
1441 ctcgagattc aggagcaatg cttggcttga aggttgtagg aggaaagatg actgaatcag
1501 gtcggctttg tgcatttatt actaaagtaa aaaaaggaag tttagctgat actgtaggac
1561 atcttagacc aggtgatgaa gtattagaat ggaatggaag actactgcaa ggagccacat
1621 ttgaggaagt gtacaacatc attctagaat ccaaacctga accacaagta gaacttgtag
1681 tttcaaggcc tattggagat ataccgcgaa tacctgatag cacacatgca caactggagt
1741 ccagttctag ctcctttgaa tctcaaaaaa tggatcgtcc ttctatttct gttacctctc
1801 ccatgagtcc tggaatgttg agggatgtcc cacagttctt atcaggacaa ctttcaataa
1861 aactatggtt tgacaaggtt ggtcaccaat taatagttac aattttggga gcaaaagatc
1921 tcccttccag ggaagatggg aggccaagga atccttatgt taaaatttac tttcttccag
1981 acagaagtga taaaaacaag agaagaacta aaacagtaaa gaaaacattg gaacccaaat
2041 ggaaccaaac attcatttat tctccagtcc accgaagaga atttcgggaa cgaatgctag
2101 agattaccct ttgggatcaa gctcgtgttc gagaggaaga aagtgaattc ttaggggaga
2161 ttttaattga attagaaaca gcattattag atgatgagcc acattggtac aaacttcaga
2221 cgcatgatgt ctcttcattg ccacttcccc acccttctcc atatatgcca cgaagacagc
2281 tccatggaga gagcccaaca cggaggttgc aaaggtcaaa gagaataagt gatagtgaag
2341 tctctgacta tgactgtgat gatggaattg gtgtagtatc agattatcga catgatggtc
2401 gagatcttca aagctcaaca ttatcagtgc cagaacaagt aatgtcatca aaccactgtt
2461 caccatcagg gtctcctcat cgagtagatg ttataggaag gactagatca tggtcaccca
2521 gtgtccctcc tccacaaagt cggaatgtgg aacaggggct tcgagggacc cgcactatga
2581 ccggacatta taatacaatt agccgaatgg acagacatcg tgtcatggat gaccattatt
2641 ctccagatag agacagtcat tttcttactc tacctcgctc cagatacagt cagaccattg
2701 accatcatca cagggatggc agggattgtg aagcagcaga tagacagcca tatcacagat
2761 ccagatcaac agaacaacgg cctctccttg agcggaccac cacccgctcc agatccactg
2821 aacgtcctga tacaaacctc atgaggtcga tgccttcatt aatgactgga agatctgccc
2881 ctccttcacc tgccttatcg aggtctcatc ctcgtactgg gtctgtccag acaagcccat
2941 caagtactcc agtcgcagga cgaaggggcc gacagcttcc acagcttcca ccaaagggaa
3001 cgttggatag aaaagcagga ggtaaaaaac taaggagcac tgtccaaaga agtacagaaa
3061 caggcctggc cgtggaaatg aggaactgga tgactcgaca ggcaagccga gagtctacag
3121 atggtagcat gaacagctac agctcagaag gaaatctgat tttccctggt gttcgcttgg
3181 cctctgatag ccagttcagt gatttcctgg atggccttgg ccctgctcag ctagtgggac
3241 gccagactct ggcaacacct gcaatgggtg acattcaggt aggaatgatg gacaaaaagg
3301 gacagctgga ggtagaaatc atccgggccc gtggccttgt tgtaaaacca ggttccaaga
3361 cactgccagc accgtatgta aaagtgtatc tattagataa cggagtctgc atagccaaaa
3421 agaaaacaaa agtggcaaga aaaacgctgg aaccccttta ccagcagcta ttatctttcg
3481 aagagagtcc acaaggaaaa gttttacaga tcatcgtctg gggagattat ggccgcatgg
3541 atcacaaatc ttttatggga gtggcccaga tacttttaga tgaactagag ctatccaata
3601 tggtgatcgg atggttcaaa cttttcccac cttcctccct agtagatcca accttggccc
3661 ctctgacaag aagagcttcc caatcatctc tggaaagttc aactggacct tcttactctc
3721 gttcatagca gctgtaaaaa aattgttgtc acagcaacca gcgttacaaa aaaaaaaaaa
3781 aaaatcacag gttgcaaacc ctggtaacac tgcatgctta atgttgtgtc ttctgagcct
3841 gtttctaggg atacaaagca atcctgtgtt ctcagaggaa gttgcacaca ttgtgcccta
3901 aagaaggccc tcaggtgaaa gagcagagct gtgaagaact atcagatttg gaattcaatg
3961 acactcgagt tctggtccaa tctgaagcca tggattaatc tcaaagaatc agtcagtttc
4021 atgcaacaga agcccttttc aatggcacct ttatattttt atcattcctt tttcttcatt
4081 tatctaaccc caaagccctg atatgccaca gaaatggagc tatacagcca tgaagcggtg
4141 ttacaggtga ggagtgtaat cctaggaagc atcaggtgaa aagcaggaga ccaaagaagt
4201 ggtcaggaac aatcatcagc cctcctctgg gcgggaatca gagcagtcag tccagcagga
4261 agagtggcag actttgtagc tccatgggca cgtcaattac taatgctaag atgtgttgga
4321 ctctgaaaaa caaaattctg tggctacact gtactgaatg aaattaaaga aacttttttt
4381 gcatggacac agattagctg aatacttaaa ttattttctt ggggctgcaa cttacaaaaa
4441 aaaaaaaaaa a
//