LOCUS BC042912 1941 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens seryl-tRNA synthetase 2, mitochondrial, mRNA (cDNA
clone MGC:52131 IMAGE:5478759), complete cds.
ACCESSION BC042912
VERSION BC042912.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1941)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1941)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: l Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149644.
FEATURES Location/Qualifiers
source 1..1941
/db_xref="H-InvDB:HIT000052756"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52131 IMAGE:5478759"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..1941
/gene="SARS2"
/gene_synonym="mtSerRS"
/gene_synonym="SARS"
/gene_synonym="SerRSmt"
/gene_synonym="SERS"
/gene_synonym="SYS"
/db_xref="GeneID:54938"
/db_xref="HGNC:HGNC:17697"
CDS 15..1571
/gene="SARS2"
/gene_synonym="mtSerRS"
/gene_synonym="SARS"
/gene_synonym="SerRSmt"
/gene_synonym="SERS"
/gene_synonym="SYS"
/codon_start=1
/product="seryl-tRNA synthetase 2, mitochondrial"
/protein_id="AAH42912.1"
/db_xref="GeneID:54938"
/db_xref="HGNC:HGNC:17697"
/translation="MAASMARRLWPLLTRRGFRPRGGCISNDSPRRSFTTEKRNRNLL
YEYAREGYSALPQLDIERFCACPEEAAHALELRKGELRSADLPAIISTWQELRQLQEQ
IRSLEEEKAAVTEAVRALLANQDSGEVQQDPKYQGLRARGREIRKELVHLYPREAQLE
EQFYLQALKLPNQTHPDVPVGDESQARVLHMVGDKPVFSFQPRGHLEIGEKLDIIRQK
RLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFTPMTVPDLLRGAVFEGCGMTP
NANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFRDLPVRMVCSSTCYRAETN
TGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMP
TQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGELQFAHTV
NATACAVPRLLIALLESNQQKDGSVLVPPALQSYLGTDRITAPTHVPLQYIGPNQPRK
PGLPGQPAVS"
BASE COUNT 415 a 615 c 558 g 353 t
ORIGIN
1 gttcccggtc caagatggct gcgtccatgg cgcggcgctt gtggcctttg ctgactcgtc
61 gggggttccg gccccgggga ggctgcatct ccaacgatag tccaaggaga agtttcacta
121 cagagaaacg aaaccggaac ctcctgtacg agtatgcgcg cgagggctac agcgcactcc
181 ctcagctgga catagagcgg ttctgcgcat gcccagaaga ggccgcacac gccctggagc
241 tccgcaaggg ggagctgcgc tcggcggacc tgcccgcgat catctcgaca tggcaggagc
301 tgaggcagct gcaggagcag atccggagcc tggaggaaga gaaggcagct gtgactgagg
361 cagtgcgggc cctgctggca aaccaggaca gtggtgaagt gcagcaggac cccaagtacc
421 agggtctgcg ggcacgtggc cgggagatcc ggaaggagct tgttcacctg taccccaggg
481 aggcccagct tgaggagcag ttctacctgc aggcgctgaa gctgcccaac cagacccacc
541 cagacgtgcc cgtcggggat gagagccagg ctcgagtgct ccacatggtc ggagacaagc
601 cagttttctc cttccaacct cggggccacc tggaaattgg cgagaaactc gacatcatcc
661 gtcagaagcg cctgtcccac gtgtctggcc accggtccta ttacctgcgc ggggctggag
721 ccctcctgca gcacggcctg gtcaacttca cattcaacaa gcttctccgc cggggcttca
781 cccccatgac ggtgccagac cttctccgcg gagcagtgtt tgaaggctgt gggatgacac
841 caaatgccaa cccatcccaa atttacaaca tcgaccctgc ccgcttcaaa gatctcaacc
901 tggctggaac agcggaggtg gggcttgcag gctacttcat ggaccacacc gtggccttca
961 gggacctgcc agtcaggatg gtttgctcca gcacctgcta ccgggcagag acaaacacgg
1021 gacaggaacc ccgggggctg tatcgagtac accacttcac caaggtggag atgtttgggg
1081 tgacaggccc tgggctggag cagagctcac agctgctgga ggagttcctg tcccttcaga
1141 tggagatctt gacagagctg ggcttgcact tccgggtcct ggatatgccc acccaagaac
1201 tgggcctccc cgcctaccgc aagtttgaca ttgaggcctg gatgccaggc cgaggccgct
1261 ttggagaggt caccagtgct tccaactgca cagacttcca gagccgccgc ctccacatca
1321 tgttccagac cgaggctggg gagctgcagt ttgcccatac ggtgaacgcc accgcctgtg
1381 ctgtcccccg ccttctcatc gcgctcctgg agagtaacca gcagaaggac ggctcagtgc
1441 tcgtgccccc tgccctccag tcctacctcg gcactgatcg gatcacagcc cctacccacg
1501 tgcctctcca gtacatcggc cccaaccagc cccggaagcc tgggctgcct ggccagcctg
1561 ctgtaagcta agaacccacc cacagcagcc ctcgggggtg tcactgcttc ctggagttca
1621 ggagaccccg gacacctggg acctgtgttg ctgagcccgt cctgacatct gtgttcttcc
1681 tgtcagctcc acgcccgggc ccctggacca cggggtccac ctctcctctg tccttgctgc
1741 ctcagagtca gtcactgacc ctgttatcat tgagggtccc agtgggaagc aggacgtctg
1801 ggctttacgg ttctagggac aggagaagca gaggaagagg cttccatccc tccttccttc
1861 tttcctccta cagtgctgag caaaaagtcc ccaataaatg gtcaggacaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa a
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