LOCUS BC042889 3108 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens CD47 molecule, mRNA (cDNA clone IMAGE:4822825), with
apparent retained intron.
ACCESSION BC042889
VERSION BC042889.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3108)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3108)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: g Column: 11
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3108
/db_xref="H-InvDB:HIT000097402"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4822825"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 969 a 527 c 584 g 1028 t
ORIGIN
1 actctgtctc aaaaaaaata aaaaagaatt atgaatatta cttttataat attctcacca
61 ctgggaaaaa tgcactattc tgtgtctaag tagctgctta ccttaaccaa gtgatatttg
121 ggcaagggga tcgttgcctt ttgctactgg ttgagacgaa gcatggcacc ccctagtaga
181 gaaggatccc aattacttcc aatttgtgat gtacacattt tagaaagata caggctattg
241 ccacagagat agaccaaaac atctcatttt ctttctttgt aaacctagat ctgatttccc
301 aactaagtct gtttcctttg tgaatgctgt gggtatgatc cacagaaagg ctacataatg
361 aaatgatagc tttacaatta atttggctgt agagttgtag actagttagc atatcattgc
421 atatttgttt atttagaaat gatttccaat tgtggaacct cactaactgc ctgcttggct
481 tgttactaat cctagcattc aaagaatcaa aaggaatgat gaatgatggt aagtataaaa
541 tgcacttaat aattatagat cagttaaaac atggacattg gaaaacaaaa aagcttcttg
601 aaaatgtggc tcttttttag taaaagggac actgtcagat gataaaggtt cacatttctt
661 gatgtataca acttaaatct actttgctaa aaattgcaaa actactactg taaaaactgt
721 agggtgtcac gaatcagact ccagtcatat ggctcccagc aaagagaaat taccactttt
781 tgtaaaatgt ttttcagatt ccgtgtctgg tgactgtaac tttaagatgc cttttataag
841 gcacataaat aatctggcac aaatctttat cattttgaca gagtttcttt tatgcttgtg
901 ttggtgattt tgttgcattt aacccatggg gacttaacat ctctgctttt ccaatcagga
961 gcttggttct aaccttttgg gagatgatta aagagagagg ttgagagaga gagagagaga
1021 gagagagaga gagagagaga tgtttcgtcc tcagcttttg cttccatttt ttttttaaga
1081 actctgggct aataacttct aatctttata gaatatttca aagaaatata tttgttctta
1141 aagatacata ggtttgagat attgagtgct acaagcattt attttggttt taccttaaca
1201 tattatgatt cctcagtttt gttggcattt agtaattatg tttatgtttt tatcttatca
1261 aaaaatgtct tcttaccttt gatatttata atcactcctc ggtcatgtaa atagtttgct
1321 ttatattttt ctgttttaaa gtctgtgacc ttacctgccc tcttctgtag caaagtgcag
1381 catttaactc aggaagctat attcccccca agtgtcatta atatttgcat aagattaaaa
1441 acactccagt cggccgggcg cggtggctca cgcctgtaat cccagcactt tgggaggccg
1501 aggcgggcgg atcacaaggt caggagatcg agaccatcct ggctaacacg gtgaaacccc
1561 gtctctacta aaactacaaa aaattagccg ggcatggtgg cgggcacctg tggtcccagc
1621 tacttgggag gctgaggcag gagaatggcg tgaacccggg aggcagagct tgcagtgagc
1681 caagatcgtg ccactacact ccagcctggg tgacagagca agactccgtc tcaagaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaacactc cagtcatgca ttggtgaaca aagtttaaaa
1801 caacgtgtat tcagcatgga gtcacagaat gatcctactt ttgtatgttt gtgtcacagc
1861 ctttaaaagc atgtcttgtt atataagcca ttaccctcct aaaaaagact atagttcaca
1921 ggaataagtt aaaagacata acaaaacata aaatgactag taccaggaat tgtgaccatg
1981 gtttgttctg gtaactgtgg catggcatgg tttgttccag gaattgtggc atggtttgtt
2041 catgtttaca ttctgatgtc ctattttttt ttttaatttc tatgtccttt ccttttcctt
2101 ggtggtgtca ttgttctgta gctgtatgaa gaaactaaac ttttctccat tttcaggaaa
2161 gcaatctaag aatcttgagt gcctcttcct ttgttaattt ctcttaagat gtgacttttt
2221 taaactactg catcaggaaa tattgtaaaa cagttttgcc ttgaatattt gtgatgaaat
2281 ctacgatgat cttcaagatt ctcttaattt tgctaatatt cagctgatca gaatttgttt
2341 ttaaaatgtc tggctggtgg gtacttccca ctgacaactg cttattgctt acagtatgtc
2401 tgccttgtca atgaatgagg ttcagggtgc ttcctaggga tcagagtcag taccattttt
2461 ctctttcatc tacagctgat cagatgttta ttttacttac attaaatgaa tgatggagat
2521 ccaaagtgaa tattatagaa tattattcta ggatcaacat cttttgcttt gaaaaatcaa
2581 catctcttgg cttttcctca gccaacccag caaacagaga ttatcagact ctgttgattt
2641 tttactttca tttggcattg gcctttttct tactgaaatt aaaaaggcta atgatttgcc
2701 tggtttctgt ctctgacctt tgcaggtcta ttttcttaat ttttagatac tatatatctg
2761 aaactttttt taatgtgtca actttttaat ggatagaaaa tagacacgaa tagtgattat
2821 gtgttcattt ttcaattttc cagaataact gaagtgaagt gatggactcc gatttggaga
2881 gtagtaagac gtgaaaggaa tacacttgtg tttaagcacc atggccttga tgattcactg
2941 ttggggagaa gaaacaagaa aagtaactgg ttgtcaccta tgagaccctt acgtgattgt
3001 tagttaagtt tttattcaaa gcagctgtaa tttagttaat aaaataatta tgatctaaaa
3061 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa agaaaaaaaa aaaaaaaa
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