LOCUS BC042633 1527 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens ESX homeobox 1, mRNA (cDNA clone MGC:34743
IMAGE:5170565), complete cds.
ACCESSION BC042633
VERSION BC042633.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1527)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1527)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: e Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38455418.
FEATURES Location/Qualifiers
source 1..1527
/db_xref="H-InvDB:HIT000097305"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34743 IMAGE:5170565"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1527
/gene="ESX1"
/gene_synonym="ESXR1"
/db_xref="GeneID:80712"
/db_xref="HGNC:HGNC:14865"
/db_xref="MIM:300154"
CDS 31..1251
/gene="ESX1"
/gene_synonym="ESXR1"
/codon_start=1
/product="ESX homeobox 1"
/protein_id="AAH42633.1"
/db_xref="GeneID:80712"
/db_xref="HGNC:HGNC:14865"
/db_xref="MIM:300154"
/translation="MESLRGYTHSDIGYRSLAVGEDIEEVNDEKLTVTSLMARGGEDE
ENTRSKPEYGTEAENNVGTEGSVPSDDQDREGGGGHEPEQQQEEPPLTKPEQQQEEPP
LLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDE
SQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQRVLMLRNTATADLAHPLDMF
LGGAYYAAPALDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPV
PPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMARVPPGPPMARVPPGP
PMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHVPHTGLAPVHIT
WAPVINSYYACPFF"
BASE COUNT 404 a 451 c 406 g 266 t
ORIGIN
1 gtgcacagct ttatcgacag cgcttgaagc atggagtctc ttcgcgggta cacccacagt
61 gatattggct accgcagcct ggcagtcggc gaggacatcg aggaagtgaa tgatgagaaa
121 cttaccgtga cctcgctgat ggcaagggga ggagaggacg aggagaatac acggtccaaa
181 cctgagtacg gaacagaagc ggaaaacaac gttggcacgg aagggtccgt cccctcggac
241 gaccaagacc gtgagggtgg cggcggccac gagccggagc aacagcagga ggagccgccc
301 ctgaccaagc cggagcaaca gcaggaggag ccgcccctgc tcgagctgaa gcaagagcag
361 gaggagccgc cccagacgac cgtggagggg ccacagccgg cggaggggcc acaaaccgct
421 gagggaccac agcccccaga gaggaaacgc cgccgccgca ccgcgttcac gcagtttcag
481 ctgcaggagc tagagaactt tttcgatgaa tctcaatatc ccgacgttgt ggcgcgagag
541 agacttgcag cacgcctgaa tttgactgaa gacagagtgc aggtttggtt tcagaacaga
601 agagccaagt ggaaacgaaa tcagagggtg ctaatgttga gaaacactgc tactgctgac
661 ctggcccacc ctttggacat gttcttgggt ggggcctatt atgctgctcc tgctctggat
721 cctgctttgt gtgttcatct ggtgccacaa ctacctagac cacctgtgct gcctgtgcca
781 cctatgccac ccaggccacc catggtccct atgccaccca ggccacccat agcacctatg
841 ccacccatgg cgcctgtgcc acccggctca cgcatggcgc ctgtgccacc cgggccacgc
901 atggcgcctg tgccaccctg gccgcccatg gcgcctgtgc caccctggcc gcccatggcg
961 cctgtgccaa ccgggccgcc catggcgcgt gtgccacccg ggccgcccat ggcgcgtgtg
1021 ccacccgggc cgcccatggc gcctctgcca cccgggccgc ccatggcgcc tctgccaccc
1081 gggccgccca tggcgcctct gccacccggg ccgcccatgg cgcctctgcc acccgggccg
1141 cccatggcgc ctctgccacc caggtcacat gtgcctcaca ctggcctggc tcctgtacac
1201 atcacatggg cccctgtcat caacagttat tatgcatgtc cctttttcta aagtaaggta
1261 ttcataacag tttttccaaa gttctttcct gccagataga aattgtgcac agcacagcat
1321 caagtaattc gttagatgct tgttaaatga agtgggtagg tgaacaaagt taacgaatgc
1381 cctgttattt ttgtaggcca cataattgta gtattttcaa taaagatgtg acttaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//