LOCUS BC042598 4074 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens gamma-aminobutyric acid (GABA) B receptor, 1, mRNA
(cDNA clone MGC:24911 IMAGE:4938491), complete cds.
ACCESSION BC042598
VERSION BC042598.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4074)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4074)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11497611.
FEATURES Location/Qualifiers
source 1..4074
/db_xref="H-InvDB:HIT000052718_09"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24911 IMAGE:4938491"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4074
/gene="GABBR1"
/gene_synonym="dJ271M21.1.1"
/gene_synonym="dJ271M21.1.2"
/gene_synonym="GABAB(1e)"
/gene_synonym="GABABR1"
/gene_synonym="GABBR1-3"
/gene_synonym="GPRC3A"
/gene_synonym="hGB1a"
/db_xref="GeneID:2550"
/db_xref="HGNC:HGNC:4070"
/db_xref="MIM:603540"
CDS 212..2746
/gene="GABBR1"
/gene_synonym="dJ271M21.1.1"
/gene_synonym="dJ271M21.1.2"
/gene_synonym="GABAB(1e)"
/gene_synonym="GABABR1"
/gene_synonym="GABBR1-3"
/gene_synonym="GPRC3A"
/gene_synonym="hGB1a"
/codon_start=1
/product="gamma-aminobutyric acid (GABA) B receptor, 1"
/protein_id="AAH42598.1"
/db_xref="GeneID:2550"
/db_xref="HGNC:HGNC:4070"
/db_xref="MIM:603540"
/translation="MGPGAPFARVGWPLPLLVVMAAGVAPVWASHSPHLPRPHSRVPP
HPSSERRAVYIGALFPMSGGWPGGQACQPAVEMALEDVNSRRDILPDYELKLIHHDSK
CDPGQATKYLYELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNR
QRFPTFFRTHPSATLHNPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERVKEAGI
EITFRQSFFSDPAVPVKNLKRQDARIIVGLFYETEARKVFCEVYKERLFGKKYVWFLI
GWYADNWFKIYDPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLT
KRLKRHPEETGGFQEAPLAYDAIWALALALNKTSGGGGRSGVRLEDFNYNNQTITDQI
YRAMNSSSFEGVSGHVVFDASGSRMAWTLIEQLQGGSYKKIGYYDSTKDDLSWSKTDK
WIGGSPPADQTLVIKTFRFLSQKLFISVSVLSSLGIVLAVVCLSFNIYNSHVRYIQNS
QPNLNNLTAVGCSLALAAVFPLGLDGYHIGRNQFPFVCQARLWLLGLGFSLGYGSMFT
KIWWVHTVFTKKEEKKEWRKTLEPWKLYATVGLLVGMDVLTLAIWQIVDPLHRTIETF
AKEEPKEDIDVSILPQLEHCSSRKMNTWLGIFYGYKGLLLLLGIFLAYETKSVSTEKI
NDHRAVGMAIYNVAVLCLITAPVTMILSSQQDAAFAFASLAIVFSSYITLVVLFVPKM
RRLITRGEWQSEAQDTMKTGSSTNNNEEEKSRLLEKENRELEKIIAEKEERVSELRHQ
LQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDRLSCDGSRVHLLYK"
BASE COUNT 856 a 1196 c 1026 g 996 t
ORIGIN
1 gaggagagtc cgcggtggcg gcgacggtgg cgagagccgc gggggccgta ggaagccaac
61 cttccctgct tctccggggc cctcgccccc tcctccccac aaaatcaggg atggaggcgc
121 ctccccggca ccctcttagc agccctcccc aggaaaagtg tcccccctga gctcctaacg
181 ctccccaaca gctacccctg ccccccacgc catggggccc ggggcccctt ttgcccgggt
241 ggggtggcca ctgccgcttc tggttgtgat ggcggcaggg gtggctccgg tgtgggcctc
301 ccactccccc catctcccgc ggcctcactc gcgggtcccc ccgcacccct cctcagaacg
361 gcgcgcagtg tacatcgggg cactgtttcc catgagcggg ggctggccag ggggccaggc
421 ctgccagccc gcggtggaga tggcgctgga ggacgtgaat agccgcaggg acatcctgcc
481 ggactatgag ctcaagctca tccaccacga cagcaagtgt gatccaggcc aagccaccaa
541 gtacctatat gagctgctct acaacgaccc tatcaagatc atccttatgc ctggctgcag
601 ctctgtctcc acgctggtgg ctgaggctgc taggatgtgg aacctcattg tgctttccta
661 tggctccagc tcaccagccc tgtcaaaccg gcagcgtttc cccactttct tccgaacgca
721 cccatcagcc acactccaca accctacccg cgtgaaactc tttgaaaagt ggggctggaa
781 gaagattgct accatccagc agaccactga ggtcttcact tcgactctgg acgacctgga
841 ggaacgagtg aaggaggctg gaattgagat tactttccgc cagagtttct tctcagatcc
901 agctgtgccc gtcaaaaacc tgaagcgcca ggatgcccga atcatcgtgg gacttttcta
961 tgagactgaa gcccggaaag ttttttgtga ggtgtacaag gagcgtctct ttgggaagaa
1021 gtacgtctgg ttcctcattg ggtggtatgc tgacaattgg ttcaagatct acgacccttc
1081 tatcaactgc acagtggatg agatgactga ggcggtggag ggccacatca caactgagat
1141 tgtcatgctg aatcctgcca atacccgcag catttccaac atgacatccc aggaatttgt
1201 ggagaaacta accaagcgac tgaaaagaca ccctgaggag acaggaggct tccaggaggc
1261 accgctggcc tatgatgcca tctgggcctt ggcactggcc ctgaacaaga catctggagg
1321 aggcggccgt tccggcgtgc gcctggagga cttcaactac aacaaccaga ccattaccga
1381 ccaaatctac cgggcaatga actcctcgtc ctttgagggt gtctctggcc atgtggtgtt
1441 tgatgccagc ggctctcgga tggcatggac gcttatcgag cagcttcagg gtggcagcta
1501 caagaagatt ggctactatg acagcaccaa ggatgatctt tcctggtcca aaacagataa
1561 atggattgga gggtcccccc cagctgacca gaccctggtc atcaagacat tccgcttcct
1621 gtcacagaaa ctctttatct ccgtctcagt tctctccagc ctgggcattg tcctagctgt
1681 tgtctgtctg tcctttaaca tctacaactc acatgtccgt tatatccaga actcacagcc
1741 caacctgaac aacctgactg ctgtgggctg ctcactggct ttagctgctg tcttccccct
1801 ggggctcgat ggttaccaca ttgggaggaa ccagttccct ttcgtctgcc aggcccgcct
1861 ctggctcctg ggcctgggct ttagtctggg ctacggttcc atgttcacca agatttggtg
1921 ggtccacacg gtcttcacaa agaaggaaga aaagaaggag tggaggaaga ctctggaacc
1981 ctggaagctg tatgccacag tgggcctgct ggtgggcatg gatgtcctca ctctcgccat
2041 ctggcagatc gtggaccctc tgcaccggac cattgagaca tttgccaagg aggaacctaa
2101 ggaagatatt gacgtctcta ttctgcccca gctggagcat tgcagctcca ggaagatgaa
2161 tacatggctt ggcattttct atggttacaa ggggctgctg ctgctgctgg gaatcttcct
2221 tgcttatgag accaagagtg tgtccactga gaagatcaat gatcaccggg ctgtgggcat
2281 ggctatctac aatgtggcag tcctgtgcct catcactgct cctgtcacca tgattctgtc
2341 cagccagcag gatgcagcct ttgcctttgc ctctcttgcc atagttttct cctcctatat
2401 cactcttgtt gtgctctttg tgcccaagat gcgcaggctg atcacccgag gggaatggca
2461 gtcggaggcg caggacacca tgaagacagg gtcatcgacc aacaacaacg aggaggagaa
2521 gtcccggctg ttggagaagg agaaccgtga actggaaaag atcattgctg agaaagagga
2581 gcgtgtctct gaactgcgcc atcaactcca gtctcggcag cagctccgct cccggcgcca
2641 cccaccgaca cccccagaac cctctggggg cctgcccagg ggaccccctg agccccccga
2701 ccggcttagc tgtgatggga gtcgagtgca tttgctttat aagtgagggt agggtgaggg
2761 aggacaggcc agtaggggga gggaaaggga gaggggaagg gcaggggact caggaagcag
2821 ggggtcccca tccccagctg ggaagaacat gctatccaat ctcatctctt gtaaatacat
2881 gtccccctgt gagttctggg ctgatttggg tctctcatac ctctgggaaa cagacctttt
2941 tctctcttac tgcttcatgt aattttgtat cacctcttca caatttagtt cgtacctggc
3001 ttgaagctgc tcactgctca cacgctgcct cctcagcagc ctcactgcat ctttctcttc
3061 ccatgcaaca ccctcttcta gttaccacgg caacccctgc agctcctctg cctttgtgct
3121 ctgttcctgt ccagcagggg tctcccaaca agtgctcttt ccaccccaaa ggggcctctc
3181 cttttctcca ctgtcataat ctctttccat cttacttgcc cttccatact ttctcacatg
3241 tggctccccc tgaattttgc ttcctttggg agctcattct tttcgccaag gctcacatgc
3301 tccttgcctc tgctctgtgc actcacgctc agcacacatg catcctcccc tctcctgcgt
3361 gtgcccactg aacatgctca tgtgtacaca cgcttttccc gtatgctttc ttcatgttca
3421 gtcacatgtg ctctcgggtg ccctgcattc acagctacgt gtgcccctct catggtcatg
3481 ggtctgccct tgagcgtgtt tgggtaggca tgtgcaattt gtctagcatg ctgagtcatg
3541 tctttcctat ttgcacacgt ccatgtttat ccatgtactt tccctgtgta ccctccatgt
3601 accttgtgta ctttcttccc ttaaatcatg gtattcttct gacagagcca tatgtaccct
3661 accctgcaca ttgttatgca cttttcccca attcatgttt ggtggggcca tccacaccct
3721 ctccttgtca cagaatctcc atttctgctt agattccccc catctccatt gcattcatgt
3781 actaccctca gtctacactc acaatcatct tctcccaaga ctgctccctt ttgttttgtg
3841 tttttttgag gggaattaag gaaaaataag tgggggcagg tttggagagc tgcttccagt
3901 ggatagttga tgagaatcct gaccaaagga aggcaccctt gactgttggg atagacagat
3961 ggacctatgg ggtgggaggt ggtgtccctt tcacactgtg gtgtctcttg gggaaggatc
4021 tccccgaatc tcaataaacc agtgaacagt gaaaaaaaaa aaaaaaaaaa aaaa
//