LOCUS BC042142 1593 bp mRNA linear HUM 01-FEB-2005
DEFINITION Homo sapiens aldehyde dehydrogenase 16 family, member A1, mRNA
(cDNA clone IMAGE:5931507), partial cds.
ACCESSION BC042142
VERSION BC042142.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1593)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1593)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: p Column: 11.
FEATURES Location/Qualifiers
source 1..1593
/db_xref="H-InvDB:HIT000097155"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5931507"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_99"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene <1..1593
/gene="ALDH16A1"
/gene_synonym="MGC10204"
/db_xref="GeneID:126133"
CDS <1..1448
/gene="ALDH16A1"
/gene_synonym="MGC10204"
/codon_start=3
/product="ALDH16A1 protein"
/protein_id="AAH42142.1"
/db_xref="GeneID:126133"
/translation="RLQERMGRLRSGRGLDGAVDMGARGAAACDLVQRFVREAQSQGA
QVFQAGDVPSERPFYPPTLVSNLPPASPCAQVEVPWPVVVASPFRTAKEALLVANGTP
RGGSASVWSERLGQALELGYGLQVGTVWINAHGLRDPSVPTGGCKESGCSWHGGPDGL
YEYLRPSGTPARLSCLSKNLNYDTFGLAVPSTLPAGPEIGPSPAPPYGLFVGGRFQAP
GARSSRPIRDSSGNLHGYVAEGGAKDIRGAVEAAHQAFPGWAGQSPGARAALLWALAA
ALERRKSTLASRLERQGAELKAAEAEVELSARRLRAWGARVQAQGHTLQVAGLRGPVL
RLREPLGVLAVVCPDEWPLLAFVSLLAPALAYGNTVVMVPSAACPLLALEVCQDMATV
FPAGLANVVTGDRDHLTRCLALHQDVQAMWYFGSAQGSQFVEWASAGNLKPVWASRGC
PRAWDQEAEGAGPELGLRVARTKALWLPMGD"
BASE COUNT 255 a 501 c 562 g 275 t
ORIGIN
1 gacggctgca ggagcggatg gggcggcttc ggagtggccg agggctggat ggggccgtgg
61 acatgggggc ccggggggct gccgcatgtg acctggtcca gcgctttgtg cgtgaggccc
121 agagccaggg tgcacaggtg ttccaggctg gtgatgtgcc ttcggaacgc ccattctatc
181 ccccaacctt ggtctccaac ctgcccccag cctccccatg tgcccaggtg gaggtgccgt
241 ggcctgtggt cgtggcctcc cccttccgca cagccaagga ggcactgttg gtggccaacg
301 ggacgccccg cgggggcagc gccagtgtgt ggagcgagag gctggggcag gcgctggagc
361 tgggctatgg gctccaggtg ggcactgtct ggatcaacgc ccacggcctc agagaccctt
421 cggtgcccac aggcggctgc aaggagagtg ggtgttcctg gcacgggggc ccagacgggc
481 tgtatgagta tctgcggccc tcagggaccc ctgcccggct gtcctgcctc tccaagaacc
541 tgaactatga cacctttggc ctcgctgtgc cctcaaccct gccggctggg cctgaaatag
601 ggcccagccc agcacccccc tatgggctct tcgttggggg ccgtttccag gctcctgggg
661 cccgaagctc caggcccatc cgggattcgt ctggcaatct ccatggctac gtggctgagg
721 gtggagccaa ggacatccga ggtgctgtgg aggccgctca ccaggctttc cctggctggg
781 cgggccagtc cccaggagcc cgggcagccc tgctgtgggc cctggcggct gcactggagc
841 gccggaagtc taccctggcc tcgaggctgg agaggcaggg agcggagctc aaggctgcgg
901 aggcggaggt ggagctgagc gcaagacgac ttcgggcgtg gggggcccgg gtgcaggccc
961 aaggccacac cctgcaggta gccgggctga gaggccctgt gctgcgcctg cgggagccgc
1021 tgggtgtgct ggctgtggtg tgtccggacg agtggcccct gcttgccttc gtgtccctgc
1081 tggctcccgc cctggcctac ggcaacactg tggtcatggt gcccagtgcg gcctgtcctc
1141 tgctggccct ggaggtctgc caggacatgg ccaccgtgtt cccagcaggc ctggccaacg
1201 tggtgacagg agaccgggac catctgaccc gctgcctggc cttgcaccaa gacgtccagg
1261 ccatgtggta tttcggatca gcccagggtt cccagtttgt cgagtgggcc tcggcaggaa
1321 acctcaaacc ggtgtgggcg agcaggggct gcccgcgggc ctgggaccag gaggccgagg
1381 gggcaggccc agagctgggg ctgcgagtgg cgcggaccaa ggccctgtgg ctgcctatgg
1441 gggactgatg cctgagcgcc acctactgca ttttggacac ctcacaccaa ggggagatgc
1501 accccacaga cacctgggac tttccccttc tggttcctgt gtctcccaat aaactctctg
1561 accaacccta aaaaaaaaaa aaaaaaaaaa aaa
//