LOCUS BC041803 1270 bp mRNA linear HUM 06-JAN-2006
DEFINITION Homo sapiens ADP-ribosylation factor-like 17 pseudogene 1, mRNA
(cDNA clone MGC:41814 IMAGE:5303659), complete cds.
ACCESSION BC041803
VERSION BC041803.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1270)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1270)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 77 Row: k Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706177.
FEATURES Location/Qualifiers
source 1..1270
/db_xref="H-InvDB:HIT000052616"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41814 IMAGE:5303659"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1270
/gene="ARL17P1"
/gene_synonym="ARL17A"
/db_xref="GeneID:51326"
/db_xref="HGNC:HGNC:24096"
/db_xref="IMGT/GENE-DB:24096"
/db_xref="MIM:24096"
CDS 97..630
/gene="ARL17P1"
/gene_synonym="ARL17A"
/codon_start=1
/product="ARL17P1 protein"
/protein_id="AAH41803.1"
/db_xref="GeneID:51326"
/db_xref="HGNC:HGNC:24096"
/db_xref="IMGT/GENE-DB:24096"
/db_xref="MIM:24096"
/translation="MGNIFEKLFKSLLGKKKMRILILSLDTAGKTTILYKLKLGETVP
AVPTVGFCVETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKGARSPGSTHQGSLASG
VLPIKCSHVEFGMWKGGRSHPFLPHSSRCAGSGGQLDSILPHQSPAWGPWGCKDLSSG
FPSFLTSSIIWKSAVVK"
BASE COUNT 332 a 289 c 272 g 377 t
ORIGIN
1 gtgtagctga actgagctga aatcctaaag gccgcggagt cggcggtgtt gtaggtagcg
61 gtaccttgag tggcaacaga attcgattaa attacaatgg gaaacatttt tgaaaagctc
121 tttaaaagtc tacttgggaa aaaaaagatg cggattctta tattgagttt ggatacagct
181 ggaaaaacca ccatcttgta taaattgaag ctgggggaga ctgtgcctgc cgtccctaca
241 gtaggtttct gtgtggagac agtagaatat aaaaataaca ccttcgctgt ctgggatgtt
301 ggcagccact tcaaaatcag acctctgtgg cagcattttt tccagaacac aaaaggtgcc
361 agaagcccag gaagcacaca tcaaggctca cttgccagcg gggtgctgcc aataaaatgt
421 agtcacgtgg aatttggaat gtggaaagga ggtagaagtc atcctttcct cccccatagc
481 agcaggtgtg caggctctgg tggtcagctg gactccatac tcccccacca gtcaccagcc
541 tggggaccgt ggggctgcaa ggacctcagc agcggtttcc caagtttcct gacttcttcc
601 atcatctgga aatcagctgt ggtaaagtag cctgaaagcc agtggtgcaa ccccatcccc
661 acaaccttca ccacctctag cacctccagt gataagcact aattgcctat atacaaccct
721 tttttgtttg aaatatctag agtaatttct gttttcctat ctggggtagt gtaacataag
781 aagaaatata tatttggtct ctgcccccag ttcctaacac aaagctccta aaacccttgg
841 aaattcctga atgatggcag tgctaagagc attgtccttt gttaatttat catttttctt
901 ttctcctagg tgttttttcc tttttaaact tttcttttag gttagggggt acatatgcac
961 gttcgttata tagctaaact tgtgtcatgg gggtttgttg tacagattat ttcatcaccc
1021 aggtaccaag cctagtaccc aatagttttt tctgctcctc tccctcctcc caccctccac
1081 cctcaggtag ggcccagtgt ctgttgttta tgagttctca tcattttgct cccacttaaa
1141 agaacataca gtatttggtt ttctgttcct gtcttagttt gctgaggata atggcctcta
1201 gctccatctg tgttcctgca aaagacatga tctcgctgtt ttttatggtt gctaaaaaaa
1261 aaaaaaaaaa
//