LOCUS BC041765 3058 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glial fibrillary acidic protein, mRNA (cDNA clone
MGC:21564 IMAGE:4186297), complete cds.
ACCESSION BC041765
VERSION BC041765.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3058)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3058)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: f Column: 19.
FEATURES Location/Qualifiers
source 1..3058
/db_xref="H-InvDB:HIT000052602"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21564 IMAGE:4186297"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3058
/gene="GFAP"
/db_xref="GeneID:2670"
/db_xref="HGNC:HGNC:4235"
/db_xref="MIM:137780"
CDS 7..1305
/gene="GFAP"
/codon_start=1
/product="glial fibrillary acidic protein"
/protein_id="AAH41765.1"
/db_xref="GeneID:2670"
/db_xref="HGNC:HGNC:4235"
/db_xref="MIM:137780"
/translation="MERRRITSAARRSYVSSGEMMVGGLAPGRRLGPGTRLSLARMPP
PLPTRVDFSLAGALNAGFKETRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELN
QLRAKEPTKLADVYQAELRELRLRLDQLTANSARLEVERDNLAQDLATVRQKLQDETN
LRLEAENNLAAYRQEADEATLARLDLERKIESLEEEIRFLRKIHEEEVRELQEQLARQ
QVHVELDVAKPDLTAALKEIRTQYEAMASSNMHEAEEWYRSKFADLTDAAARNAELLR
QAKHEANDYRRQLQSLTCDLESLRGTNESLERQMREQEERHVREAASYQEALARLEEE
GQSLKDEMARHLQEYQDLLNVKLALDIEIATYRKLLEGEENRITIPVQTFSNLQIRET
SLDTKSVSEGHLKRNIVVKTVEMRDGEVIKESKQEHKDVM"
BASE COUNT 694 a 866 c 926 g 572 t
ORIGIN
1 agcaggatgg agaggagacg catcacctcc gctgctcgcc gctcctacgt ctcctcaggg
61 gagatgatgg tggggggcct ggctcctggc cgccgtctgg gtcctggcac ccgcctctcc
121 ctggctcgaa tgccccctcc actcccgacc cgggtggatt tctccctggc tggggcactc
181 aatgctggct tcaaggagac ccgggccagt gagcgggcag agatgatgga gctcaatgac
241 cgctttgcca gctacatcga gaaggttcgc ttcctggaac agcaaaacaa ggcgctggct
301 gctgagctga accagctgcg ggccaaggag cccaccaagc tggcagacgt ctaccaggct
361 gagctgcgag agctgcggct gcggctcgat caactcaccg ccaacagcgc ccggctggag
421 gttgagaggg acaatctggc acaggacctg gccactgtga ggcagaagct ccaggatgaa
481 accaacctga ggctggaagc cgagaacaac ctggctgcct atagacagga agcagatgaa
541 gccaccctgg cccgtctgga tctggagagg aagattgagt cgctggagga ggagatccgg
601 ttcttgagga agatccacga ggaggaggtt cgggaactcc aggagcagct ggcccgacag
661 caggtccatg tggagcttga cgtggccaag ccagacctca ccgcagccct gaaagagatc
721 cgcacgcagt atgaggcaat ggcgtccagc aacatgcatg aagccgaaga gtggtaccgc
781 tccaagtttg cagacctgac agacgctgct gcccgcaacg cggagctgct ccgccaggcc
841 aagcacgaag ccaacgacta ccggcgccag ttgcagtcct tgacctgcga cctggagtct
901 ctgcgcggca cgaacgagtc cctggagagg cagatgcgcg agcaggagga gcggcacgtg
961 cgggaggcgg ccagttatca ggaggcgctg gcgcggctgg aggaagaggg gcagagcctc
1021 aaggacgaga tggcccgcca cttgcaggag taccaggacc tgctcaatgt caagctggcc
1081 ctggacatcg agatcgccac ctacaggaag ctgctagagg gcgaggagaa ccggatcacc
1141 attcccgtgc agaccttctc caacctgcag attcgagaaa ccagcctgga caccaagtct
1201 gtgtcagaag gccacctcaa gaggaacatc gtggtgaaga ccgtggagat gcgggatgga
1261 gaggtcatta aggagtccaa gcaggagcac aaggatgtga tgtgaggcag gacccacctg
1321 gtggcctctg ccgcgtctca tgaggggccc gagcagaagc aggatagttg ctccgcctct
1381 gctggcacat ttccccagac ctgagctccc caccacccca gctgctcccc tccctcctct
1441 gtccctaggt cagcttgctg ccctaggctc cgtcagtatc aggcctgcca gacggcaccc
1501 acccagcacc cagcaactcc aactaacaag aaactcaccc ccaaggggca gtctggaggg
1561 gcatggccag cagcttgcgt tagaatgagg aggaaggaga gaaggggagg agggcggggg
1621 gcacctacta catcgccctc cacatccctg attcctgttg ttatggaaac tgttgccaga
1681 gatggaggtt ctctcggagt atctgggaac tgtgcctttg agtttcctca ggctgctgga
1741 ggaaaactga gactcagaca ggaaagggaa ggccccacag acaaggtagc cctggccaga
1801 ggcttgtttt gtcttttggt ttttatgagg tgggatatcc ctatgctgcc taggctgacc
1861 ttgaactcct gggctcaagc agtctaccca cctcagcctc ctgtgtagct gggattatag
1921 attggagcca ccatgcccag ctcagagggt tgttctccta gactgaccct gatcagtcta
1981 agatgggtgg ggacgtcctg ccacctgggg cagtcacctg cccagatccc agaaggacct
2041 cctgagcgat gactcaagtg tctcagtcca cctgagctgc catccaggga tgccatctgt
2101 gggcacgctg tgggcaggag ggagcttgat tctcagcact tgggggatct gttgtgtacg
2161 tggagaggga tgaggtgctg ggagggatag aggggggctg cctggccccc agctgtgggt
2221 acagagaggt caagcccagg aggactgccc cgtgcagact ggaggggacg ctggtagaga
2281 tggaggagga ggcaattggg atggcgctag gcatacaagt aggggttgtg ggtgaccagt
2341 tgcacttggc ctctggattg tgggaattaa ggaagtgact catcctcttg aagatgctga
2401 aacaggagag aaaggggatg tatccatggg ggcagggcat gactttgtcc catttctaaa
2461 ggcctcttcc ttgctgtgtc ataccaggcc gccccagcct ctgagcccct gggactgctg
2521 cttcttaacc ccagtaagcc actgccacac gtctgaccct ctccacccca tagtgaccgg
2581 ctgcttttcc ctaagccaag ggcctcttgc ggtcccttct tactcacaca caaaatgtac
2641 ccagtattct aggtagtgcc ctattttaca attgtaaaac tgaggcacga gcaaagtgaa
2701 gacactggct catattcctg cagcctggag gccgggtgct cagggctgac acgtccaccc
2761 cagtgcaccc actctgcttt gactgagcag actggtgagc agactggtgg gatctgtgcc
2821 cagagacggg actgggaggg cccacttcag ggttctcctc tcccctctaa ggccgaagaa
2881 gggtccttcc ctctccccaa gacttggtgt cctttccctc cactccttcc tgccacctgc
2941 tgctgctgct gctgctaatc ttcagggcac tgctgctgcc tttagtcgct gaggaaaaat
3001 aaagacaaat gctgcgccct taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//