LOCUS BC041432 2157 bp mRNA linear HUM 25-MAR-2004
DEFINITION Homo sapiens transmembrane protein 20, mRNA (cDNA clone
IMAGE:4525988), partial cds.
ACCESSION BC041432
VERSION BC041432.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2157)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2157)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 87 Row: d Column: 19.
FEATURES Location/Qualifiers
source 1..2157
/db_xref="H-InvDB:HIT000096701"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4525988"
/tissue_type="Bladder, transitional cell papilloma"
/clone_lib="NIH_MGC_93"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2157
/gene="TMEM20"
/gene_synonym="C10orf60"
/gene_synonym="FLJ33990"
/db_xref="GeneID:159371"
CDS <1..888
/gene="TMEM20"
/gene_synonym="C10orf60"
/gene_synonym="FLJ33990"
/codon_start=1
/product="TMEM20 protein"
/protein_id="AAH41432.1"
/db_xref="GeneID:159371"
/translation="GLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIP
CLIYRKTGFIGPKGQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSI
FAWICLKEKYSPWDALFTVFTITGVILIVRPPFLFGSDTSGMEESYSGHLKGTFAAIG
SAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFL
IFIGLFGLGGQIFITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGAL
CVVASNVGAAIRKWYQSSK"
misc_feature 28..396
/gene="TMEM20"
/gene_synonym="C10orf60"
/gene_synonym="FLJ33990"
/note="DUF6; Region: Integral membrane protein DUF6. This
family includes many hypothetical membrane proteins of
unknown function. Many of the proteins contain two copies
of the aligned region"
/db_xref="CDD:pfam00892"
BASE COUNT 623 a 346 c 403 g 785 t
ORIGIN
1 ggcttgtttt acacattatt gtctgccttc cttttctcag tgggctcttt atttgttaaa
61 aaagtgcaag acgtccatgc tgtagagatt agtgcgtttc gatgtgtgtt ccaaatgcta
121 gttgttatcc cttgcttaat atacagaaaa actgggttta taggcccaaa aggtcaacga
181 attttcctca ttctcagagg agtccttggt tctaccgcca tgatgcttat atactatgct
241 taccagacaa tgtccctcgc tgatgccaca gttatcacgt ttagcagtcc agtgtttacg
301 tccatatttg cttggatatg tctcaaggaa aaatatagcc cttgggatgc tcttttcacc
361 gtgttcacaa tcactggagt gatccttatc gtgagaccac catttttgtt tggttccgac
421 acttcgggga tggaagaaag ctattcaggc caccttaagg gaacattcgc agcaattgga
481 agtgccgtat ttgctgcatc gactctagtt atcctaagaa aaatgggaaa atctgtggac
541 tactttctga gcatttggta ttatgtagta cttggcctcg ttgaaagtgt catcatcctc
601 tctgtattag gagagtggag tctgccttac tgtgggttgg acaggctatt tctcatattc
661 attgggctct ttggtttggg gggtcagata tttatcacaa aagcacttca aatagaaaaa
721 gcagggccag tagcaataat gaagacaatg gatgtggtct ttgcttttat ctttcagatt
781 attttcttta ataatgtgcc aacgtggtgg acagtgggtg gtgctctctg cgtagtagcc
841 agtaatgttg gagcggccat tcgtaaatgg taccaaagtt ccaaatgaag catcattgct
901 gaaatacata tttttttcaa gtacaccatc acctaattca catacagcat acgcacacat
961 ctggaaaatc tgcattttct tcattggttg tatttaataa attgcctaaa gtaccatttt
1021 tgaatatagt atgtctttag ttaagaatag ctagtctgtt tggtgtaaca attttttggt
1081 agctttggtt ttggttttgg ttttttttgt tgttgttgtt ggggtcaagt tggtgagagg
1141 agagctcatt gtttgaagaa aaaccaaaac attttatggc tagtaatatt tatgtaattt
1201 ttaaaatgta tttttggtac tgatgggata tgggtgggga ggctatttta gatattcttt
1261 tagcagtgta gagcctaaga aacttggttc tactaccatg atctttataa actatgcctt
1321 ccagacaatt gataatgctg ctataattag tattatgttg ataattcatt tgcaacctta
1381 ttctatttag gaggatgaag ttgaagctta gaataggtgc ctgcttaatg gtgttaataa
1441 tacaaatgaa ttggccttat tttcaaggat tttataaatg attatcatac ttgtaactca
1501 tatttgtgcc ttttcatttt aatgctggaa tttttattat gtcacctcta aaacacttaa
1561 attgccaaat ttggctagta gttttgtttc agtggcatta gcaactgcag ctagcatact
1621 ataattttaa ttgtcctcac ttttttttga aactgcacta aatttttctt aacattccaa
1681 gatttcagat ctctaaatca caaagagaaa tcttggcatg accagtgtgc acgtttccat
1741 cctgaagtgt tttctcttca ctagaaatgt gattttctat aaattcccct tgaatttata
1801 gtgtgatgcc aaataaaatt ttctcaggat cttattaggt tgaaccatat gtaattgcca
1861 agattttact attttaactt agaaaaacca tcgtttcata tgattcaccc taatagatac
1921 ctccattatt ctctaaatga aatagaagac tttggagtat atgtttttaa agtaattttt
1981 taaaatatgg taatgtatta aacttatttt tatagttatg aaattatgtg taataatgct
2041 ttatgttata cattaaatgt aaagacttgt gaatccatgt ttgattgact ttcatagttt
2101 cctgcattga aataaaatca ctatgaattc taaaaaaaaa aaaaaaaaaa aaaaaaa
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