LOCUS BC041383 3954 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens ADP-ribosylation factor GTPase activating protein 3,
mRNA (cDNA clone IMAGE:5275602), with apparent retained intron.
ACCESSION BC041383
VERSION BC041383.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3954)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3954)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: h Column: 1
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3954
/db_xref="H-InvDB:HIT000096658"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5275602"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1030 a 872 c 846 g 1206 t
ORIGIN
1 agcggaggat tgcttgaatc caggagttgg aggctgcagt gagccatgat catgccacac
61 taccctccag cctaggtgac agagtcagac catctcaaaa aacaaagaaa agggccagga
121 gcggtggctc acgcctgtga tcctcggcct cccagagtgc tgggattgcg ggcgtgagcc
181 actgcgcctg gccatacgta gttttacgaa aatattaatg tgcatgcttt tctctgtagt
241 cttccttttt tcatcaacat gggtgttcca ccaatgacac caatgccaag tacaacagtc
301 gtgctgctca gctctatagg gagaaaatca aatcgctcgc ctctcaagca acacggaagc
361 atggcactga tgtaagtcac tggaggctgg attgtttcct ttagatacat gttcacttca
421 tagaaaaagt gatttttatc ctgaatagta aaacttttct acctgagttg tcttacaagg
481 aattagtgta cagtagattc ttactattga agtagttatg ttctgtaaat tcatcatgag
541 tactggatta gtgaatacta aaacattgct cctaggagaa atacaggatt aggttcctat
601 aagctctggt ctcattttca tcaactgatc aatacataac cttatttaac atgtgtttct
661 atttaaagac acctttttaa atatatattg atggctcatg aatattgaac tcacagccaa
721 ggactataac tcagccctga atgaagctta tttaatgcct gaattttctc catgaggcac
781 atcacagcct tcatgtgctt cagaacatta gatagccctt cagtactgca cttgagaggc
841 atcttaaaaa atgacatcct caataaaaag catgggaata tgaagaacat agcacaaaat
901 aaactgcaga aaggacattt gttatgagaa ctgaaacaag aaggcagagt agtgtgtctt
961 gttctacctc agctgagaat gtgcttcttg ggcaactcat tttttgctgc actattctcc
1021 aaatgactga aaacaccacg aggactaatt ttgggttaaa cgtaaatttt agcaagtagg
1081 tagattcata aatatggaat ccatgaataa caaggattga ttatcatttg gaacctgcat
1141 ttagatatga agtctttgat ctttcctttt cagaaatggt ttatgtgttt gaggtccttg
1201 acttcctcaa ggtttggaag caaaatttac tggatgatag attactaaag tgcacgcaga
1261 ggtcctctgt agggatgtta ctgattttat aagaatggaa agcaccaatc tttaggaaac
1321 aggtctctaa gggaagtgaa aggtatcaaa taaaatcctt tacaggccgg atgaaatgct
1381 cagccctgtg ttgttttttt gttctagctg tggcttgata gttgtgtggt tccacctttg
1441 tcccctccac caaaggagga agattttttt gcctctcacg tttctcctga ggtatgtatt
1501 atgcttcaca tcattttaaa gtgtgcttac tctgacagtt aacaaaaggt gcatatttaa
1561 aatgttagga tgtaggctaa gctcttgtaa caagaagtgc tgaaacataa ctactgaaga
1621 gagaaatgac attatcaaca attccaaggt taggatatct gctattgact gatggactta
1681 ctttgctgtt ctcaacatgt ggcttccatc tcagggtcta aagcagctgc tccagtttaa
1741 gactctccca gattaagaga aaaagacaag catccttgag agctaatgcc ctattcttct
1801 atttatttat ttttgggggg actgaatctg gctctgtttc ccaggctgga gtgcagtggc
1861 acgatctcag ctcattacaa cctctgcccc ctgggttcaa gtgattctcc agcctcagcc
1921 tcccgagtag ctgggactac aggtgcgcac caacacaccc agctaatatt ttttttgaga
1981 tggagtttcg ctcttgtcac ctagggtgga gtgcaatggt gtgatcttgg ctcactgcaa
2041 tctccgcctc ctgggttcaa gcgattctct tgcctcagcc tcccgagtag ctgggacaac
2101 aggtgcacgc caccacacct ggctaatttt tgtatttgta gtagagacga ggtttcacca
2161 tattggctag gctggtctcg aactcctgac ctcaggtgat acccccgcct tggccaccca
2221 aagttctggg attataggtg tgagccacca taccccacca cagatgccct attcttttac
2281 agaaaaagtc tggagggagc tcccatccct tctacttatg tcctatgagc tggaatttag
2341 ttgcatgtct tatctagctg ctagggagaa ctgagaattt attactagta gtgtgccaca
2401 gttcagttca gagctctgaa actgactaaa aatgaaaaca tttttaatag gggtttcatt
2461 ctcagtgctc cagttttgct gtttatgtag tattatctca aagctattgg atgagttaat
2521 gcaggtaaaa gtacttagta cctggcacaa agtaagcctt cagtaagtgc tctaaatatc
2581 actatcttca tctttgtgac ctgatagcaa cagtgacagc aatccatagt acttctgtgg
2641 cctctcctca gatcacttag atctagggaa agtaaagcct aaaaggcgac aatatttact
2701 atttggccct ttcttttctt tcttcctttc tttttttttt ttttttttta aagacggagt
2761 tttccctctt gtttcccagg ctgtagcgca atggcgcgat ctcggctcac tgcaacatcc
2821 acctcccggg ttcaagcgat tctcctgcct cggcctccca actagctggg attataggca
2881 tgtgccacca cacctggcta attttgtatt tttagtggag acggggtttc gccatgttgg
2941 tcaggcttgt ctcaaactcc tgacctcagg tgatccacct gcttcggcct cctaaagtgc
3001 tgggattata ggcatgagcc accacaccgg gcctactatt tagcccttta aggtaacgtg
3061 tgcctacctc tgtcttggac catcatatgt tctgccagct actctagctc ctcccagtcc
3121 cactgggtaa ggagcacgat ttgttgaact cttgctcaat ctattcttta attttctttt
3181 tttctttcgt tttttttttt tttgagatgg agtcttactc ttctgtcacc cacgttggag
3241 tgcactggca caatcttggc tcactgcagc ctctgcctcc caggttcagg tgattctcct
3301 gcctcagcct cccaagtagt tgggattaca ggcccacacc accacgcctg gctaattttt
3361 tttgtaattt tagtagagac agggtttcac catattggcc agtctggtct cgaactcctg
3421 acctcaggtg atctgcctgc cgcagcctcc caaaatgctg ggattacaga tgtgagccac
3481 tgtgcccagc ttattcctta attttcaatt taaaactatg taaagttgta cacaggttgt
3541 taaagcttgt tttttgggtt tttttttttt tttgctatta taatttgcac atacttatta
3601 gcattgtcac agtcaatagt taccaaaaat ggttatcaag aaagaggaga acaggccagg
3661 catgttggct catgcctgta atctcagcag tttgggaggc cgaggtggga ggatagcttg
3721 agcccaggcg tttgagacga gcctgggcag catagtgaga ctccttctct acaaaaaatt
3781 taaactttag ctgggcgtgg tggcacatgc ctgcaatctc agctactcag gaggctgagg
3841 tggaagcact gcttgagcct gggaggtcaa ggctccagtg agctgtgatt gtgcttctgc
3901 actctagcct gggcaacaga agagtaagac cctgtttcta aaaaaaaaaa aaaa
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