LOCUS BC041367 4000 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens vacuolar protein sorting 35 (yeast), mRNA (cDNA clone
IMAGE:5273475), partial cds.
ACCESSION BC041367
VERSION BC041367.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4000)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4000)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC041367.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: e Column: 4.
FEATURES Location/Qualifiers
source 1..4000
/db_xref="H-InvDB:HIT000096645"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5273475"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescript"
BASE COUNT 1122 a 839 c 907 g 1132 t
ORIGIN
1 agtggcacct gggtcgaccc tccttgtagc ccctgctctc tcccaccgcc ccgcactcca
61 gcgagtggag aaggggcccc acagaccgtt cgggattaag accagcccga tttggcctgc
121 gggatagggg acagcaggag gaaggccgcg ggcaggctga tccgggccgg ggtgggcggc
181 ggctcttggc tgcggccgtt gctgagagac ggggcggcct ctctgtgggg ttgacttggc
241 atgtaggctt tggggtccat gaaggcctgc ggcctccttt aagtggaatc ggtcacctgc
301 ctaccacgag gggaccggta gtcctaggtc tgagcgtctg gcccccgggg cgcgtggagg
361 ccctgagact cggaggtggc gccgggaccc gcccagatgt tgcgtttcta cctttgtgcc
421 tagttgtgct cggccgtccc cacgccctcc tggaggggtc gcagtgattc cttggccttt
481 cttggcctca tacccgcctt cggctgcagt gtttgtcagc gagttctggg gacctgctta
541 catgaatttc ctggaaggac tcaggctgtc ttctaatcct gacggtcgca aaggagactg
601 attgtttact ttagcatttg tgcattgggc gcaccttgcc tcttttgtct cgccattgat
661 aaaatccaag tatttgactt gctggaagca gtacttctcc ttagggcccg tctatgacgg
721 cagcaaatcg tggtgtggct gttggccggt aaacttgaac ttcctcaaaa tgtgaatctt
781 tgtgtctggt tcccacaaag cctacaacac agcagtcccc tcaggatgag caggaaaagc
841 tcttggatga agccatacag gctgtgaagg tccagtcatt ccgaatgaag agatgcctgg
901 acaaaaacaa gcttatggat gctctaaaac atgcttctaa tatgcttggt gaactccgga
961 cttctatgtt atcaccaaag agttactatg aactttatat ggccatttct gatgaactgc
1021 actacttgga ggtctacctg acagatgagt ttgctaaagg aaggaaagtg gcagatctct
1081 acgaacttgt acagtatgct ggaaacatta tcccaaggct ttaccttttg atcacagttg
1141 gagttgtata tgtcaagtca tttcctcagt ccaggaagga tattttgaaa gatttggtag
1201 aaatgtgccg tggtgtgcaa catcccttga ggggtctgtt tcttcgaaat taccttcttc
1261 agtgtaccag aaatatctta cctgatgaag gagagccaac agatgaagaa acaactggtg
1321 acatcagtgg ttccatggat tttgtactgc tcaactttgc agaaatgaac aagctctggg
1381 tgcgaatgca gcatcaggga catagccgag atagagaaaa aagagaacga gaaagacaag
1441 aactgagaat tttagtggga acaaatttgg tgcgcctcag tcagttggaa ggtgtaaatg
1501 tggaacgtta caaacagatt gttttgactg gcatattgga gcaagttgta aactgtaggg
1561 atgctttggc tcaagaatat ctcatggagt gtattattca ggttttccct gatgaatttc
1621 acctccagac tttgaatcct tttcttcggg cctgtgctga gttacaccag aatgtaaatg
1681 tgaagaacat aatcattgct ttaattgata gattagcttt atttgctcac cgtgaagatg
1741 gacctggaat cccagcggat attaaacttt ttgatatatt ttcacagcag gtggctacag
1801 tgatacagtc tagacaagac atgccttcag aggatgttgt atctttacaa gtctctctga
1861 ttaatcttgc catgaaatgt taccctgatc gtgtggacta tgttgataaa gttctagaaa
1921 caacagtgga gatattcaat aagctcaacc ttgaacatat tgctaccagt agtgcagttt
1981 caaaggaact caccagactt ttgaaaatac cagttgacac ttacaacaat attttaacag
2041 tcttgaaatt aaaacatttt cacccactct ttgagtactt tgactacgag tccagaaaga
2101 gcatgagttg ttatgtgctt agtaatgttc tggattataa cacagaaatt gtctctcaag
2161 accaggtgga ttccataatg aatttggtat ccacgttgat tcaagatcag ccagatcaac
2221 ctgtagaaga ccctgatcca gaagattttg ctgatgagca gagccttgtg ggccgcttca
2281 ttcatctgct gcgctctgag gaccctgacc agcagtactt gattttgaac acagcacgaa
2341 aacattttgg agctggtgga aatcagcgga ttcgcttcac actgccacct ttggtatttg
2401 cagcttacca gctggctttt cgatataaag agaattctaa agtggatgac aaatgggaaa
2461 agaaatgcca gaagattttt tcatttgccc accagactat cagtgctttg atcaaagcag
2521 agctggcaga attgccctta agactttttc ttcaaggagc actagctgct ggggaaattg
2581 gttttgaaaa tcatgagaca gtcgcatatg aattcatgtc ccaggcattt tctctgtatg
2641 aagatgaaat cagcgattcc aaagcacagc tagctgccat caccttgatc attggcactt
2701 ttgaaaggat gaagtgcttc agtgaagaga atcatgaacc tctgaggact cagtgtgccc
2761 ttgctgcatc caaacttcta aagaaacctg atcagggccg agctgtgagc acctgtgcac
2821 atctcttctg gtctggcaga aacacggaca aaaatgggga ggagcttcac ggaggcaaga
2881 gggtaatgga gtgcctaaaa aaagctctaa aaatagcaaa tcagtgcatg gacccctctc
2941 tacaagtgca gctttttata gaaattctga acagatatat ctatttttat gaaaaggaaa
3001 atgatgcggt aacaattcag gttttaaacc agcttatcca aaagattcga gaagacctcc
3061 cgaatcttga atccagtgaa gaaacagagc agattaacaa acattttcat aacacactgg
3121 agcatttgcg cttgcggcgg gaatcaccag aatccgaggg gccaatttat gaaggtctca
3181 tcctttaaaa aggaaatagc tcaccatact cctttccatg tacatccagt gagggtttta
3241 ttacgctagg tttcccttcc atagattgtg cctttcagaa atgctgaggt aggtttccca
3301 tttcttacct gtgatgtgtt ttacccagca cctccggaca ctcaccttca ggaccttaat
3361 aaaattattc acttggtaag tgttcaagtc tttctgatca ccccaagtag catgactgat
3421 ctgcaattta aaattcctgt gatctgtaaa aaaaaaaaaa aaaaaaaaaa aaaacaaaac
3481 ccacaagcac ttatcttggc tactaatgaa gctctccttt tttttgtttg tttgtttgct
3541 tcattgttga ttgtgtattt tcttcattcc tggggagtac taacccaaaa gcgtctgtct
3601 cttgttttct agtccagttt gagattaatt tagaagaaag gaatactgta tgtgaaattc
3661 atcttgggct ttcccctaaa ttgcaagata aggccatgtg taagattttc cctaaaacta
3721 gaatatatta atgcatgttt gagaatttta aagcaccatg gtcaaaacca gaagctatat
3781 tttgcatatt tggactcagc catccattaa gaacccatgt tgtcctctgg acatatttat
3841 caatataatt gggttttaaa tagtataaaa gaaaacttgt gatctatata atttatgtat
3901 caccttcatt gtaaatttag caggaaatgc atcacaatta tgattttttt ttttgcacca
3961 gtgaaacaat aaagatgcta ttaacaaaaa aaaaaaaaaa
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