LOCUS BC041168 1861 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens lipocalin 12, mRNA (cDNA clone MGC:48935
IMAGE:5165480), complete cds.
ACCESSION BC041168
VERSION BC041168.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1861)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1861)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341771.
FEATURES Location/Qualifiers
source 1..1861
/db_xref="H-InvDB:HIT000052532"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48935 IMAGE:5165480"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1861
/gene="LCN12"
/db_xref="GeneID:286256"
/db_xref="HGNC:HGNC:28733"
CDS 13..1080
/gene="LCN12"
/codon_start=1
/product="LCN12 protein"
/protein_id="AAH41168.1"
/db_xref="GeneID:286256"
/db_xref="HGNC:HGNC:28733"
/translation="MRLLCGLWLWLSLLKVLQAQTPTPLPLPPPMQSFQGNQFQGEWF
VLGLAGNSFRPEHRALLNAFTATFELSDDGRFEVWNAMTRGQHCDTWSYVLIPAAQPG
QFTVDHGVEPGADREETRVVDSDYTQFALMLSRRHTSRLAVLRISLLGRSWLLPPGTL
DQFICLGRAQGLSDDNIVFPDVTGNMVHLQACWAVGTGPAGMSLVDPRGAGPSVYPGS
SAPACAQGSPGSWVPVLNPGSEPPPAAPGPLSWATSSHPGSPVPGHLLPPQVPCPGPP
PPAPPAPGPLSRPTSSHPGSPVLGYLLPPQVPCPGPSPPSGSPVLGHLLPSPIPAHKE
LGLIPGGALDLSSLPWVAAPA"
BASE COUNT 342 a 690 c 474 g 355 t
ORIGIN
1 gcagctgcca ggatgaggct gctgtgtggc ctgtggctgt ggctctcctt gctgaaagtc
61 ctgcaggccc agaccccaac ccccctgcca ctcccgcccc cgatgcagag cttccaagga
121 aaccagttcc agggggaatg gttcgtcctg ggcctggcgg gcaacagctt caggccggag
181 cacagggcgc tgctgaacgc tttcaccgca acttttgagc taagtgatga tggccgcttt
241 gaggtgtgga atgcgatgac tcgaggccag cactgtgaca catggtctta tgtgctgata
301 ccggcagccc agcctgggca gttcactgtg gaccacggtg tggagcccgg ggcggacaga
361 gaggagaccc gggtggtgga cagcgactac acccagttcg ccctgatgct gtcccgcaga
421 cacacgagca ggctggccgt cctcaggatc agcctgctgg gcaggagctg gttgctgcct
481 cccgggacgc tggaccagtt catctgcctg ggcagagctc agggcctctc ggatgacaac
541 attgtcttcc cagatgtgac tggtaacatg gttcacctgc aggcatgctg ggcagtaggc
601 acggggcccg caggaatgag tttggttgac cctagaggag ctggacccag tgtctaccca
661 gggagctcag ccccagcctg cgctcagggg tctccaggct cctgggtccc tgtgctcaac
721 ccaggctctg agccacctcc tgccgccccg ggtcccctgt cctgggccac ctcctcccac
781 cccgggtctc ctgtcccggg ccacctcctc ccgccccagg tcccctgtcc cgggccacct
841 ccccctgccc ctcccgcccc aggtcccctg tcccggccca cctcctccca ccccgggtct
901 cctgtcctgg gctacctcct cccaccccag gtcccctgtc ccgggccatc tcctccctct
961 gggtcccctg tcctgggcca cctcctcccc tcacccatcc ctgctcacaa ggagcttgga
1021 ctcatcccag gaggtgccct ggacctcagc agcctgccct gggtggcagc cccagcctga
1081 ccactcagac agccgcggcc cccaaggcct gactcttctt gtgggagggc gaggtcagct
1141 tgagtccctc ctcttcctgg agggatgccc accgtgccct tctgattccc gcctctggtc
1201 ctttacatgt gcataaccac atgcacacac actcacgcat gagcaaacgt gtacagactg
1261 gcacatgcct ccacatgcga acacccactt acacacacgc cactcacact ggcacacatg
1321 ctgtctaccc gtgcacaggc acacgtgctg gtctgcacac acctgcacac acctgcacac
1381 tcgctatgcc aggcctcctg ggtctgcagt gagtctgggg gcccatgggg acagggacag
1441 gtgaggggct tcctgaggac ctggggctgt tgggagccgc tgtgggccac atcttctgcc
1501 ccttctcagc ctccctcacc ccagcccctt cccctagacc cactgctggt cccctttctc
1561 cctcctgctt ctcacctgaa gccacctgcc cctcctttgt gccctccctt gcttcctcct
1621 gggctctgtc ccctgctccc cctttgtcct ccatcccgac tccatctccc ccaccaggct
1681 ggtcacccca ggccagcgtc tgttgaagga tgaagcagct cctgtccggc ccagccctgc
1741 ctcacagctg tgcgagctct gccctcctca gctctcaaac ctgaataaat gcaccaagcc
1801 cagaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 a
//