LOCUS BC041157 1989 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens thromboxane A synthase 1 (platelet), mRNA (cDNA clone
MGC:48726 IMAGE:5755195), complete cds.
ACCESSION BC041157
VERSION BC041157.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1989)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1989)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13699838.
FEATURES Location/Qualifiers
source 1..1989
/db_xref="H-InvDB:HIT000052526"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48726 IMAGE:5755195"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1989
/gene="TBXAS1"
/gene_synonym="CYP5"
/gene_synonym="CYP5A1"
/gene_synonym="GHOSAL"
/gene_synonym="THAS"
/gene_synonym="TS"
/gene_synonym="TXAS"
/gene_synonym="TXS"
/db_xref="GeneID:6916"
/db_xref="HGNC:HGNC:11609"
/db_xref="MIM:274180"
CDS 152..1756
/gene="TBXAS1"
/gene_synonym="CYP5"
/gene_synonym="CYP5A1"
/gene_synonym="GHOSAL"
/gene_synonym="THAS"
/gene_synonym="TS"
/gene_synonym="TXAS"
/gene_synonym="TXS"
/codon_start=1
/product="thromboxane A synthase 1 (platelet)"
/protein_id="AAH41157.1"
/db_xref="GeneID:6916"
/db_xref="HGNC:HGNC:11609"
/db_xref="MIM:274180"
/translation="MMEALGFLKLEVNGPMVTVALSVALLALLKWYSTSAFSRLEKLG
LRHPKPSPFIGNLTFFRQGFWESQMELRKLYGPLCGYYLGRRMFIVISEPDMIKQVLV
ENFSNFTNRMASGLEFKSVADSVLFLRDKRWEEVRGALMSAFSPEKLNEMVPLISQAC
DLLLAHLKRYAESGDAFDIQRCYCNYTTDVVASVAFGTPVDSWQAPEDPFVKHCKRFF
EFCIPRPILVLLLSFPSIMVPLARILPNKNRDELNGFFNKLIRNVIALRDQQAAEERR
RDFLQMVLDARHSASPMGVQDFDIVRDVFSSTGCKPNPSRQHQPSPMARPLTVDEIVG
QAFIFLIAGYEIITNTLSFATYLLATNPDCQEKLLREVDVFKEKHMAPEFCSLEEGLP
YLDMVIAETLRMYPPAFRFTREAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSPE
TFNPERFTAEARQQHRPFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFRFQACPE
TQVPLQLESKSALGPKNGVYIKIVSR"
BASE COUNT 485 a 519 c 511 g 474 t
ORIGIN
1 ctgagaaaga gcacattgtg ggggcccact ccatgtgatg tttgcttggt tgcctgttcc
61 cttttctacc tgcagagcac ggttcccata agggcggcga gatcagcctc ctgtctcatc
121 tggaagacca ccactctggg gtctcagagg aatgatggaa gccttggggt ttctaaaatt
181 ggaagtgaat ggccccatgg tgacggtggc cctgtcagtg gctctcttgg ccctcctgaa
241 atggtactcc acatcagcat tctcaagact ggagaagtta ggcctcagac atcccaagcc
301 ttctcctttc attggaaact tgacattttt ccgccagggt ttttgggaaa gccaaatgga
361 gctcagaaag ctgtatggac ctctgtgtgg gtactatctt ggtcgtcgga tgtttattgt
421 tatttctgag ccagacatga tcaagcaggt gttggttgag aacttcagta actttaccaa
481 cagaatggcg tcgggtttgg agttcaagtc ggtagccgac agcgttctgt ttttacgtga
541 caaaagatgg gaagaggtca gaggtgccct gatgtctgct ttcagtcctg aaaagctgaa
601 cgagatggtt cccctcatca gccaagcctg cgaccttctc ctggctcatt taaaacgcta
661 tgcggaatct ggggacgcat ttgacatcca gaggtgctac tgcaattaca ccacagatgt
721 ggttgccagc gtcgcctttg gcaccccggt ggactcctgg caggcccctg aggatccctt
781 tgtgaaacac tgcaagcgtt tcttcgaatt ctgcatcccc agacctatcc tggttttact
841 cttatcattt ccatccataa tggtcccact ggcccggatt ttgcccaata agaaccgaga
901 cgaactgaat ggctttttta acaaactcat taggaatgtg attgccttgc gggaccagca
961 agctgccgaa gagaggcgga gagacttcct ccaaatggtc ctggatgccc gacattctgc
1021 aagtcccatg ggcgtgcaag actttgacat cgtcagagac gttttctcct ctactgggtg
1081 caagccgaac ccttcccggc aacaccagcc cagccctatg gccaggcctt tgactgtgga
1141 tgagattgtg ggccaggcct tcatcttcct catcgctggc tatgaaatca tcaccaacac
1201 actttctttt gccacctacc tactggccac caaccctgac tgccaagaga agcttctgag
1261 agaggtagac gtttttaagg agaaacacat ggcccctgag ttctgcagcc tcgaggaagg
1321 cctgccctat ctggacatgg tgattgcaga gacgctgagg atgtacccgc cagctttcag
1381 attcacacgg gaggcagctc aggactgcga ggtgctgggg cagcgcatcc ccgcaggcgc
1441 tgtgctagag atggccgtgg gtgccctgca ccatgaccct gagcactggc caagcccgga
1501 gaccttcaac cctgaaaggt tcacggctga ggcccggcag cagcaccggc ccttcacgta
1561 cctgcccttc ggggccggcc cacggagctg cctcggggtg cgtctagggc tgcttgaggt
1621 caagttgaca ctgctccacg tgctgcacaa gttccggttc caagcctgcc ctgagaccca
1681 ggtaccgctg cagctagaat ccaaatctgc cctaggtcca aaaaatggtg tctatatcaa
1741 gatcgtatcc cgctgacaca gaaggctgcc gggtgggggg agggcacccc caaattcaaa
1801 gaaaacccta agtgtggatg ttcagaattt tggaaaaatg tcactgaagt gattgaaaga
1861 gtgcctggca tgcaaggata agaggttctt tacataacat ttcctaaatg cttaataaac
1921 gtttgttgca cttggttttg acattgccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaa
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