LOCUS BC041048 2698 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens low density lipoprotein receptor-related protein 4,
mRNA (cDNA clone IMAGE:4905883), partial cds.
ACCESSION BC041048
VERSION BC041048.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2698)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2698)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC041048.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 44 Row: g Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2698
/db_xref="H-InvDB:HIT000096553"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4905883"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2698
/gene="LRP4"
/gene_synonym="MEGF7"
/db_xref="GeneID:4038"
/db_xref="MIM:604270"
CDS <1..564
/gene="LRP4"
/gene_synonym="MEGF7"
/codon_start=1
/product="LRP4 protein"
/protein_id="AAH41048.1"
/db_xref="GeneID:4038"
/db_xref="MIM:604270"
/translation="GEGLHISYAIGGLLSILLILVVIAALMLYRHKKSKFTDPGMGNL
TYSNPSYRTSTQEVKIEAIPKPAMYNQLCYKKEGGPDHNYTKEKIKIVEGICLLSGDD
AEWDDLKQLRSSRGGLLRDHVCMKTDTVSIQASSGSLDDTETEQLLQEEQSECSSVHT
AATPERRGSLPDTGWKHERKLSSESQV"
BASE COUNT 699 a 644 c 666 g 689 t
ORIGIN
1 ggggaaggac ttcatatcag ctacgccatt ggtggactcc tcagtattct gctgattttg
61 gtggtgattg cagctttgat gctgtacaga cacaaaaaat ccaagttcac tgatcctgga
121 atggggaacc tcacctacag caacccctcc taccgaacat ccacacagga agtgaagatt
181 gaagcaatcc ccaaaccagc catgtacaac cagctgtgct ataagaaaga gggagggcct
241 gaccataact acaccaagga gaagatcaag atcgtagagg gaatctgcct cctgtctggg
301 gatgatgctg agtgggatga cctcaagcaa ctgcgaagct cacggggggg cctcctccgg
361 gatcatgtat gcatgaagac agacacggtg tccatccagg ccagctctgg ctccctggat
421 gacacagaga cggagcagct gttacaggaa gagcagtctg agtgtagcag cgtccatact
481 gcagccactc cagaaagacg aggctctctg ccagacacgg gctggaaaca tgaacgcaag
541 ctctcctcag agagccaggt ctaaatgccc acattctctt ccctgcctgc ctgttccttc
601 tcctttatgg acgtctagtc cttgtgctcg cttacaccgc aggccccgct tctgtgtgct
661 tgtcctcctc ctcctcccac cccataactg ttcctaagcc ttcaccggag ctgtttacca
721 cgtgagtcca taactacctg tgcacaagaa atgatggcac atcacgagaa tttagacctg
781 gattttacca tgaacctcac atcttgtact ccatcctggg ccccctgaaa ctgcttattc
841 gtgattcctc accagcgtag agctccacct cccctttccc cagtaccctc agtgcctgct
901 tctcagtgct gatgcagctg atgacccagg actgcgctct gccccatcac agccagcatg
961 actgcttctc tgagagaact tgcccatcag gggctgggac atgggggtgt gggtaatgac
1021 agggatgaag gatagaggct gagagaagaa ggaagaatca gcccagcagg tatgggcatc
1081 tgggaaacct ccagcctcaa gtgtgttggt aacatgaaaa agctctgggg ggtagttgga
1141 tctgggtgtc tggtccattg ctggcagtgg acattattct tgccctaaga gacactgcct
1201 tttcagcagc agatactggt gagatggggg tggctcaggc tgttcttcct cctcctagaa
1261 tgtctggagc tgtttctaca ttcagataac tgggtcccct atcacaaggc tactggctaa
1321 taggaattcc ctcctggtgc caccactggc cagtaccttt cctaagtctt tgctcaaatt
1381 aaccaggttg tgagccagtg gcttgagtga atgttaggcc ttgggggctg agtctctgaa
1441 aagtctaaga agctctgcct agaccaaata tggtatacct cctgacccct ctctccctca
1501 tgtcctggga ttctggggaa gagacctaga aacaagcttt caaagaaaaa ccagaagttg
1561 tcataaatgg tcagaaagaa cgatcaggtt ggagacttgg gaaacccagg gcctaaagag
1621 aagtatccat gagggtcaaa cttcctgttg aacttcctat gttctttctc aagtgctcag
1681 ggatctaagt tagtggacag caagcctgtg gctacggggt ggtgatgttc ctcttccagc
1741 tgtcccctca gctaaggggc ttagtttcca tgtgggatgc catcacttgg ttcatgctca
1801 ttcacacaaa gggcacgtgt ctcagcctgg tatcagggaa attgagactt atttttgccc
1861 taaaacgtct ccctagctgt tcttcgtggg gtttttttgt ttgttttttt gcctaatttg
1921 ctttttctga ccaagccttg tggcaccagc aatctccaaa gtcctgtggt gggagggctg
1981 aataaataaa aatacaaaga ggtgggtaag gagtaggaag gtagagagca ccactgatga
2041 ggccctccta gcccatggca gacccagacc tcttctcccc caggaattag aagtggcagg
2101 agagaacaac aggggctggg aatggagggg agaatttcta ggggaagttt cctgagttga
2161 aacttctcct gtggttactg gtattgagaa atcagctacc aaagtgaaaa aggacaagat
2221 caattctttt ctagtcagtt ctaagactgc tagagagaga taccaggccc ttagccttgc
2281 tctcagtagc gtcagcccca gttctgagcc tccccacatt acacttaaca agcagtaaag
2341 gagtgagcac tttgggtcct tagactcatg tctggggagg aagagcaagt agaaaagtgg
2401 cattttcttg attggaaagg gggaaggatc ttattgcact tgggctgttc agaatgtaga
2461 aaggacatat ttgaggaagt atctatttga gcactgattt actctgtaaa aagcaaaatc
2521 tctctgtcct aaactaatgg aagcgattct cccatgctca tgtgtaatgg ttttaacgtt
2581 actcactgga gagattggac tttctggagt tatttaacca ctatgttcag tattttagga
2641 ctttatgata atttaatata aatttagctt ttcttaatca aaaaaaaaaa aaaaaaaa
//