LOCUS BC040951 1386 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 2, interacting
protein, mRNA (cDNA clone IMAGE:4429013), partial cds.
ACCESSION BC040951
VERSION BC040951.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1386)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1386)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC040951.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: b Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4759171.
FEATURES Location/Qualifiers
source 1..1386
/db_xref="H-InvDB:HIT000096478"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4429013"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1386
/gene="SFRS2IP"
/gene_synonym="CASP11"
/gene_synonym="SIP1"
/gene_synonym="SRRP129"
/db_xref="GeneID:9169"
/db_xref="MIM:603668"
CDS 314..>1386
/gene="SFRS2IP"
/gene_synonym="CASP11"
/gene_synonym="SIP1"
/gene_synonym="SRRP129"
/codon_start=1
/product="SFRS2IP protein"
/protein_id="AAH40951.1"
/db_xref="GeneID:9169"
/db_xref="MIM:603668"
/translation="MTTPTRRSTRNTRAETASQSQRSPISDNSGCDAPGNSNPSLSVP
SSAESEKQTRQAPKRKSVRRGRKPPLLKKKLRSSVAAPEKSSSNDSVDEETAESDTSP
VLEKEHQPDVDSSNICTVQTHVENQSANCLKSCNEQIEESEKHTANYDTEERVGSSSS
ESCAQDLPVLVGEEGEVKKLENTGIEANVLCLESEISENILEKGGDPLEKQDQISGLS
QSEVKTDVCTVHLPNDFPTCLTSESKVYQPVSCPLSDLSENVESVVNEEKMTESSLVE
ITEHKDFTLKTEELIESPKLESSEGEIIQTVGRQSVKSPEVQLLGHVETEDVEIIATC
DTFGNEDFNNIQDSENNLLKKKK"
BASE COUNT 501 a 241 c 290 g 354 t
ORIGIN
1 tacagaattt atagaagcca gtgaaatcag tgcattgatt aggcagaaga gacatgaact
61 ggaattgtca tggtttcctg atacattacc tggaattgga agaattggtt ttataccctg
121 gaatgttgaa acagaagtcc ttcctctcat ttcttctgtg ttgccaagaa ctatttttcc
181 aacaagtacc atatctttcg aacattttgg tacttcttgc aagggatatg cattagcaca
241 tactcaagaa ggggaagaaa agaagcaaac ttctggtaca tcaaatacca gaggatcaag
301 acgaaaacct gcaatgacaa ctcctacaag gagatctaca cgtaacacaa gagctgaaac
361 agccagtcag tctcagagat ccccaatatc agacaattct gggtgtgatg ccccaggtaa
421 cagtaatcca tctttaagtg ttccctcttc agctgagtca gaaaagcaaa caagacaggc
481 tccaaaacgg aagtctgtaa gaagaggaag aaaaccacct ttactgaaaa agaaacttcg
541 gagctctgta gctgcccctg aaaaatcatc ttccaatgat tcagtagatg aagaaacagc
601 agaatctgac acatcacctg tgttagaaaa agagcaccaa ccagatgtag acagtagtaa
661 catttgtact gtgcagactc atgtagaaaa ccagtctgct aattgcttga aaagttgcaa
721 tgagcaaata gaagaaagtg agaagcatac tgcaaattat gatacagagg aaagagtagg
781 atcttcatct tctgagtctt gtgctcaaga tcttcctgtg ctagttggtg aggaagggga
841 agttaaaaaa ctcgagaata caggtataga ggctaatgtt ttgtgtttgg aaagtgagat
901 ttctgaaaat attcttgaaa aaggaggtga tccattggaa aagcaagacc agatatctgg
961 actttcacaa tcagaggtaa agacagatgt atgtacagtt catcttccaa atgattttcc
1021 tacatgttta acatctgaaa gcaaagtgta ccaacctgta tcttgtcccc taagtgactt
1081 atctgagaat gtagagtcag tggttaatga agaaaaaatg acagagagtt ccctagtaga
1141 aattactgaa cataaagatt ttacactaaa aacagaggag cttatagaga gccccaagtt
1201 agaatcttct gagggtgaaa ttatacagac agtgggcaga caatctgtta agagcccaga
1261 ggttcaattg cttgggcatg ttgaaactga agatgtagaa ataattgcaa catgtgatac
1321 ttttgggaat gaagatttca ataatattca agactctgaa aataacttac taaaaaaaaa
1381 aaaaaa
//