LOCUS BC040929 2431 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 1, mRNA (cDNA
clone IMAGE:4472317), partial cds.
ACCESSION BC040929
VERSION BC040929.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2431)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2431)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 88 Row: a Column: 22.
FEATURES Location/Qualifiers
source 1..2431
/db_xref="H-InvDB:HIT000096464"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4472317"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2431
/gene="HERC1"
/gene_synonym="p532"
/gene_synonym="p619"
/db_xref="GeneID:8925"
/db_xref="MIM:605109"
CDS <1..1958
/gene="HERC1"
/gene_synonym="p532"
/gene_synonym="p619"
/codon_start=3
/product="HERC1 protein"
/protein_id="AAH40929.1"
/db_xref="GeneID:8925"
/db_xref="MIM:605109"
/translation="FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL
TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDV
YAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPPRAPGV
SVPLQLGLPDTVPPQYGALREVSIHTVRARLRLLYHFSDLMYSSWRLLNLSPNNQNST
SHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSIGKTMVQGKNYGPQITVKRISTRGRKC
KPIFVQIARQVVKLNASDLRLPSRAWKVKLVGEGADDAGGVFDDTITEMCQELETGIV
DLLIPSPNATAEVGYNRDRFLFNPSACLDEHLMQFKFLGILMGVAIRTKKPLDLHLAP
LVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDSGITEESFHEMIPLDSFVGQSAD
GKMVPIIPGGNSIPLTFSNRKEYVERAIEYRLHEMDRQVAAVREGMSWIVPVPLLSLL
TAKQLEQMVCGMPEISVEVLKKVVRYREVDEQHQLVQWFWHTLEEFSNEERVLFMRFV
SGRSRLPANTADISQRFQIMKVDRPYDSLPTSQTCFFQLRLPPYSSQLVMAERLRYAI
NNCRSIDMDNYMLSRNVDNAEGSDTDY"
BASE COUNT 647 a 559 c 588 g 637 t
ORIGIN
1 cttttggaga tggagactat ggaaaactag gcttaggaaa ttccactgca aaatcttcac
61 ctcagaaaat tgacgtcctt tgtggaattg gaataaaaaa ggttgcttgt ggaactcagt
121 tttctgttgc tttgaccaaa gatggtcatg tgtatacctt tggtcaagat cgcctgatag
181 gcttgccaga ggggcgtgct cgcaatcaca atcgaccgca acaaatccct gtcctggctg
241 gagtaatcat agaagatgtg gcagttggag ctgaacacac acttgctttg gcatcaaatg
301 gagatgtgta tgcctggggg agcaattcag aagggcagct cggcttaggc cataccaacc
361 atgttcgaga accaaccctg gtaacaggtc tgcaagggaa aaatgttcgg cagatctcgg
421 ctggccgctg ccacagtgct gcatggacag caccacctgt cccaccaaga gcaccaggtg
481 tgtcagtacc tctgcagctg ggcctgcctg acacagtgcc cccccagtat ggggcgctga
541 gagaagtcag cattcacacg gtgcgggcca ggctccggct gctctaccac ttctctgacc
601 tcatgtactc atcctggaga ctgctgaacc ttagccccaa caaccagaac agcacatccc
661 attataatgc tggaacttgg ggcattgtac agggacaact tcggcctttg ttagccccaa
721 gagtctacac tctgccaatg gtgcgctcca taggaaaaac catggttcaa ggcaaaaact
781 atggacctca gataactgta aagaggatat caaccagagg acggaagtgt aagcctattt
841 ttgtccaaat agcgagacaa gtagttaagc tgaatgcttc agacctccgc ctgccttccc
901 gagcgtggaa ggttaagctg gttggagaag gggctgatga tgctggagga gtgtttgatg
961 acaccatcac agagatgtgc caggaacttg aaactggtat tgttgacctt cttataccct
1021 ctcccaatgc caccgcagaa gtgggttaca atagggacag gttccttttt aacccttctg
1081 cctgcctcga tgaacactta atgcagttta agtttttagg aattttaatg ggggttgcca
1141 ttcgcacaaa gaagcctctg gacctccact tggcccctct ggtgtggaag cagctgtgct
1201 gtgtcccact caccctagag gacctggagg aggtggatct gctctacgtg cagactctca
1261 acagcattct tcacattgaa gacagtggga ttaccgagga gagtttccat gagatgattc
1321 ctcttgattc ttttgttggc cagagtgctg atggcaaaat ggttcctata atccctggtg
1381 gaaatagtat cccactcaca ttttccaaca ggaaggaata tgtggagagg gccattgaat
1441 atcgacttca tgagatggac agacaggtgg ctgcagtccg agaagggatg tcctggattg
1501 ttcctgtgcc gctgctgtcc ctcctcacag caaaacaact ggagcagatg gtgtgtggga
1561 tgcccgagat ctctgtggaa gtcttgaaga aagtggtgcg gtaccgtgag gtggatgagc
1621 agcatcagct ggtgcagtgg ttctggcaca cgctggaaga gttctccaat gaggagcggg
1681 tgcttttcat gaggtttgtg tcaggaagat ctcgactacc agccaacact gctgacattt
1741 ctcagagatt tcaaatcatg aaggttgata ggccttacga cagtctgcct acctcacaga
1801 cctgcttctt ccagctgagg ctgcccccgt actccagcca gctggtcatg gccgagcgcc
1861 tgcgctatgc catcaacaac tgccgctcaa tcgacatgga caactacatg ctctcgagaa
1921 acgtggacaa cgccgagggc tccgacactg actactgacc gtgcgggtgc tctcaccctc
1981 ccttctctcc ctcaataatg ctcacttctg atttgatgtt gatatacttt tatggtaact
2041 acatagatgt tataagaaca taaaccaaca ttataaacaa tggccacatt tagttactct
2101 aaatgtaaca aagaaattag atgtttttat ttttctgtga ttgtacaaaa acaacaaaaa
2161 cgaagtgctc tcagtcaggt ttttccctcc atatttttgg tcacttttga taagtttgca
2221 tgaaaccatt ttggtgcatt tttagttggg aatggtacat ttttgtaaat ccacccagtg
2281 aacatgaaat tgtacattgt gtataattgt tcattagaaa ggacagtttt acatgaatat
2341 tcatatattt attttgtttt aatttgaatt gcctgttcag ggttccttat gcagagaaat
2401 aaagcagatt caggaaaaaa aaaaaaaaaa a
//