LOCUS BC040656 1709 bp mRNA linear HUM 27-JUL-2005
DEFINITION Homo sapiens leucine rich repeat containing 3B, mRNA (cDNA clone
MGC:42127 IMAGE:4798356), complete cds.
ACCESSION BC040656
VERSION BC040656.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1709)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1709)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 70 Row: h Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16945968.
FEATURES Location/Qualifiers
source 1..1709
/db_xref="H-InvDB:HIT000052440"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42127 IMAGE:4798356"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1709
/gene="LRRC3B"
/gene_synonym="LRP15"
/db_xref="GeneID:116135"
CDS 594..1373
/gene="LRRC3B"
/gene_synonym="LRP15"
/codon_start=1
/product="LRRC3B protein"
/protein_id="AAH40656.1"
/db_xref="GeneID:116135"
/translation="MNLVDLWLTRSLSMCLLLQSFVLMILCFHSASMCPKGCLCSSSG
GLNVTCSNANLKEIPRDLPPETVLLYLDSNQITSIPNEIFKDLHQLRVLNLSKNGIEF
IDEHAFKGVAETLQTLDLSDNRIQSVHKNAFNNLKARARIANNPWHCDCTLQQVLRSM
ASNHETAHNVICKTSVLDEHAGRPFLNAANDADLCNLPKKTTDYAMLVTMFGWFTMVI
SYVVYYVRQNQEDARRHLEYLKSLPSRQKKADEPDDISTVV"
BASE COUNT 484 a 406 c 387 g 432 t
ORIGIN
1 agcggaaacg cagagctagg aggtgtgggc ctcgggtgag gggagaccca gctcttagac
61 ctgggagccc agacagaggt ggatctgccc accttgcagc tcccagagga ctcctgctgc
121 cttgtaccag ttgggaaaag caaaattcag agcagttcct ttttctgggt ccctcgcctt
181 ggccacatca gaggaaacgt cgactcgcca gggctcccgg gagaaatccc gaggtcagtc
241 cctcccattc tggggcaccc ctggagcagc tagctccctg cctagcggtg gcaaactcca
301 gagccccaag gagcagaacg gggattccct gtgcgcaggc tcctggtgca gctcctgagc
361 acaaaggcca caccctcaca gaccaggcct ggtgagagag ccgggcttct tcagaagtac
421 ctggatacct gaggtgccca agcaaggaaa gaaataatga agagacacat gtgttagctg
481 cagccttttg aaacacgcaa gaaggaaatc aatagtgtgg acagggctgg aacctttacc
541 acgcatgttg gagtagatga ggaatgggct cgtgattatg ctgacattcc agcatgaatc
601 tggtagacct gtggttaacc cgttccctct ccatgtgtct cctcctacaa agttttgttc
661 ttatgatact gtgctttcat tctgccagta tgtgtcccaa gggctgtctt tgttcttcct
721 ctgggggttt aaatgtcacc tgtagcaatg caaatctcaa ggaaatacct agagatcttc
781 ctcctgaaac agtcttactg tatctggact ccaatcagat cacatctatt cccaatgaaa
841 tttttaagga cctccatcaa ctgagagttc tcaacctgtc caaaaatggc attgagttta
901 tcgatgagca tgccttcaaa ggagtagctg aaaccttgca gactctggac ttgtccgaca
961 atcggattca aagtgtgcac aaaaatgcct tcaataacct gaaggccagg gccagaattg
1021 ccaacaaccc ctggcactgc gactgtactc tacagcaagt tctgaggagc atggcgtcca
1081 atcatgagac agcccacaac gtgatctgta aaacgtccgt gttggatgaa catgctggca
1141 gaccattcct caatgctgcc aacgacgctg acctttgtaa cctccctaaa aaaactaccg
1201 attatgccat gctggtcacc atgtttggct ggttcactat ggtgatctca tatgtggtat
1261 attatgtgag gcaaaatcag gaggatgccc ggagacacct cgaatacttg aaatccctgc
1321 caagcaggca gaagaaagca gatgaacctg atgatattag cactgtggta tagtgtccaa
1381 actgactgtc attgagaaag aaagaaagta gtttgcgatt gcagtagaaa taagtggttt
1441 acttctccca tccattgtaa acatttgaaa ctttgtattt cagtttcttt tgaattatgc
1501 cactgctgaa cttttaacaa acactacaac ataaataatt tgagtttagg tgatccacca
1561 cttaattgta cccccgatgg tatatttctg agtaagctac tatctgaaca ttagttagat
1621 ccatctcact atttaataat gaaatttatt tttttaattt aaaagcaaat aaaagcttaa
1681 ctttgaacca tggaaaaaaa aaaaaaaaa
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