LOCUS BC040501 5190 bp mRNA linear HUM 04-AUG-2006
DEFINITION Homo sapiens leucine rich repeat containing 37A, mRNA (cDNA clone
MGC:33880 IMAGE:5295808), complete cds.
ACCESSION BC040501
VERSION BC040501.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5190)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5190)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: k Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..5190
/db_xref="H-InvDB:HIT000052406"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33880 IMAGE:5295808"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..5190
/gene="LRRC37A"
/gene_synonym="DKFZp686N1231"
/gene_synonym="KIAA0563"
/db_xref="GeneID:9884"
/db_xref="HGNC:HGNC:29069"
CDS 4..5106
/gene="LRRC37A"
/gene_synonym="DKFZp686N1231"
/gene_synonym="KIAA0563"
/codon_start=1
/product="leucine rich repeat containing 37A"
/protein_id="AAH40501.2"
/db_xref="GeneID:9884"
/db_xref="HGNC:HGNC:29069"
/translation="MSSAQCPALVCVMSRLRFWGPWPLLMWQLLWLLVKEAQPLEWVK
DPLQLTSNPLGPPDSWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQES
TENLVPFLDTWDSAGEQPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSL
AEIIGITRQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQF
HLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLP
NHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVE
PSATQQEAPIEPPVSPMEHELSISEQQQPVQPSESSREVESSLTQQETPGQPPEHHEV
TVSPPGHHQTHHLDSPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATARLSGSGNDVE
PPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEE
GESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPT
MKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTE
VGHSTAPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEP
STALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPT
TEETSTQPPDLGLAIIPEPTTETGHSTALEKTTAPHPDRVQTLHQSLTEVTGPPTELE
PAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVP
VPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLS
LQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILN
HNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLILPSHMACCLCQ
FKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIVE
PEEPSDSSGINLSGFGSEQLDTNDESDFISTLSYILPYFSAVNLDVKSLLLPFIKLPT
TGNSLAKIQTVGQNRQRVKRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENAAEEK
RLTSPAPREVEQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPA
KALPQVRDRSKDLTHAISILESAKARVTNTKTSKPIVHARKKYRFHKTRSHVTHRTTK
VKKSPKVRKKSYLSRLMLANRLPFSAAKSLINSPSQGAFSSLGDLSPQENPFLEVSAL
SEHFIGKNNTKHTTARNAFEENDFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGP
TVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSLIPNNNVRRLI
AHVIRTLKMDCSGAHVQVTCAKLISRTGHLMKLLSGQQEVKASKIEWDTDQWKIENYI
NESTEAQSEQKEKSLELKKEVPGYGYTDKLILALIVTGILTILIILFCLIVICCHRRS
LQEDEEGFSRGIFRFLPWRGCSSRRESQDGLSSFGQPLWFKDLYKPLSATRINNHAWK
LHKKSSNEDKILNRDPGDSEAPTEGEESEALP"
BASE COUNT 1542 a 1407 c 1114 g 1127 t
ORIGIN
1 agaatgtctt ctgctcagtg cccggcacta gtgtgtgtca tgtcccggct gcgtttctgg
61 ggcccatggc ccctccttat gtggcaacta ttgtggctac tagttaagga ggctcagcct
121 ctggagtggg tcaaggaccc gctccagctc acctctaatc ccctggggcc gcctgactcc
181 tggtcttccc actcctccca tttcccacgg gaatctcccc atgcgcctac tctcccagca
241 gacccgtggg actttgatca cctggggccc tctgcttcct cagagatgcc agccccaccc
301 caggaatcga ctgaaaattt ggttccattc ctggacacct gggattcagc tggagagcag
361 cccctggagc cagagcagtt cttggcttca cagcaggatt taaaggacaa gctgagtcca
421 caggaaagac tccctgtttc gcccaagaag ctgaagaaag atccagctca gcgttggagc
481 cttgctgaga ttattggaat tacacgccaa ttatccacac ctcagagtca gaaacagact
541 ttgcagaatg aatattccag tacagataca ccgtatcccg gtagcctgcc tccagaactc
601 cgggtgaagt cagatgagcc tccagggccc tctgagcaag ttggaccttc tcaattccat
661 ctagagcccg aaactcaaaa tccagagacc cttgaagaca tccagtcctc ttcactccag
721 caagaagccc cagcacagct tccacagctc cttgaggaag aaccttcttc aatgcagcag
781 gaggccccag ctctgcctcc agagtcctct atggagagtc taactctacc gaatcatgag
841 gtgtcagttc aacctccagg tgaggatcaa gcttattatc acttgcccaa cattacagtt
901 aaacctgcag atgtggaggt taccataact tcagagccta ccaatgagac agaatcttcc
961 caagcccagc aggagacccc aattcagttt ccagaggagg tggaaccttc tgcaacccaa
1021 caggaggccc caattgagcc tccagtttct cctatggagc atgaactttc catcagtgag
1081 cagcagcagc cagttcagcc ttctgagtct tctagggagg tcgaatcttc tctgacccag
1141 caggagaccc caggtcagcc tccagaacat catgaagtca cagtttcacc tccaggtcac
1201 catcaaactc atcatttaga ttcacccagt gtctctgtga agcctccaga cgtgcagctc
1261 accatagcag cagagcctag tgcagaggtg ggaacttctc tagtccacca ggaggctaca
1321 gctcggctct cagggtcagg taatgatgta gaacctcccg ccatccagca cgggggccca
1381 cctctgcttc cagagtcatc agaagaagct ggacctttag cagttcaaca ggagacttca
1441 tttcaatctc cggaacctat taataatgag aacccctctc caacccagca ggaggctgca
1501 gctgagcatc cacagaccgc tgaggagggt gagtcttccc taacccatca ggaggcccca
1561 gctcagactc cagagttccc taatgtagtt gtagctcaac ctccagagca ttcacacctg
1621 actcaagcca cagttcaacc tttggatctg gggtttacca tcactccaga atccatgaca
1681 gaggttgaac tttctccaac catgaaggag accccaactc agcctcctaa gaaagttgta
1741 ccccaacttc gagtatatca aggggtaaca aatccaacac caggtcagga tcaagctcag
1801 catccagtgt cacccagcgt tacagttcaa cttttggacc tgggacttac catcactcca
1861 gaacccacta cggaggttgg acattctaca gccccgaaga ggactatagt ttctccaaag
1921 catcctgagg tgacacttcc tcatccagac caggttcaga ctcagcattc acacctgact
1981 cgagccacag ttcaaccttt ggacctgggg tttaccatca ctccaaaatc catgacagag
2041 gttgaacctt ctacagccct gatgactaca gctcctcctc caggacaccc tgaggtgaca
2101 cttccacctt cagacaaggg tcaggctcag cattcacacc tgactcaagc caccgttcaa
2161 cctctggacc tggagcttac cataactaca aaacctacta cagaggttaa accatctcca
2221 accacagagg agacctcaac tcagcctcca gacctgggac ttgccatcat tccagaaccc
2281 actacagaga ctggacattc tacagccctg gagaagacta cagctcctca tccagaccgg
2341 gttcagactc tgcatcaaag cctgactgaa gtcacaggtc cacctactga actagaacct
2401 gctcaggatt cactggtgca gtctgaaagt tacacccaaa ataaggcttt aactgcacca
2461 gaggaacaca aggcctccac aagcaccaac atatgtgagc tctgtacctg cggagatgag
2521 atgttgtcat gtattgatct caacccagag cagaggctcc gccaagtgcc tgtgccagag
2581 cccaacaccc acaatggcac cttcaccatc ttaaatttcc aaggaaacta tatttcttac
2641 attgatggaa atgtatggaa agcatacagt tggactgaga aactaattct cagagaaaat
2701 aacttgactg aattacacaa ggattcattt gaaggcctgc tatccctcca gtatttagat
2761 ttatcctgca ataaaataca gtctattgaa agacatacat ttgaaccact accatttttg
2821 aagtttataa atcttagttg caatgtaatt acagaactca gctttggaac atttcaggcc
2881 tggcacggaa tgcagttttt acataagtta attctcaatc acaatcctct gacaactgtt
2941 gaagatccgt atctctttaa attgccagca ttaaaatatc tagacatggg aacaacgcta
3001 gtcccactta caacacttaa gaacattctc atgatgactg ttgaactgga aaaactgatc
3061 ttacctagcc atatggcctg ctgcctctgc caatttaaaa acagcattga ggctgtctgc
3121 aagacagtca agctgcattg caacagtgca tgtctgacaa acaccacaca ttgtcctgaa
3181 gaagcatcgg tagggaatcc agaaggagcg ttcatgaagg tgttacaagc ccggaagaac
3241 tacacaagca ctgagctgat tgttgagcca gaggagccct cagacagcag tggcatcaac
3301 ttgtcaggct ttgggagtga gcagctagac accaatgacg agagtgattt tatcagtaca
3361 ctaagttaca tcttgcctta tttctcagcg gtaaacctag atgtgaaatc actgttacta
3421 ccgttcatta aactgccaac cacaggaaac agcctggcaa agattcaaac tgtaggccaa
3481 aaccggcaga gagtgaagag agtcctcatg ggcccaagga gcatccagaa aaggcacttc
3541 aaagaggtag gaaggcagag catcaggagg gaacagggtg cccaggcatc tgtggagaac
3601 gctgccgaag aaaaaaggct cacgagtcca gccccaaggg aggtggaaca gccccacaca
3661 cagcaggggc ctgagaagtt agcgggaaac gccgtctaca ccaagccttc gttcacccaa
3721 gagcataagg cagcagtctc tgtgctgaaa cccttctcca agggcgcgcc ttctacctcc
3781 agccctgcaa aagccctacc acaggtgaga gacagatcga aagacttaac ccacgctatt
3841 tccattttag aaagtgcaaa ggctagagtt acaaatacga agacgtctaa accaatcgta
3901 catgccagaa aaaaataccg ctttcacaaa actcgctccc acgtgaccca cagaacaacc
3961 aaagtcaaaa agagtccaaa ggtcagaaag aaaagttatc tgagtagact gatgctcgca
4021 aacaggcttc cattctctgc agcgaagagc ctcataaatt ccccttcaca aggggctttt
4081 tcatccttag gagacctgag tcctcaagaa aacccttttc tggaagtatc tgctctttca
4141 gaacatttta tagggaagaa taatacaaaa cacacaactg caagaaatgc ctttgaagaa
4201 aatgatttta tggaaaacac taacatgcca gaaggaacca tctctgaaaa cacaaactac
4261 aatcatcctc ctgaggcaga ttccgctggg actgcattca acttagggcc aactgttaaa
4321 caaactgaga caaaatggga atacaacaac gtgggcactg acctgtcccc cgagcccaaa
4381 agcttcaatt acccattgct ctcgtcccca ggtgatcagt ttgaaattca gctaacccag
4441 cagctacagt cccttatccc caacaacaat gtgagaaggc tcattgctca tgttatccgg
4501 accttgaaga tggactgctc tggggcccat gtgcaagtga cctgtgccaa gctcatctcc
4561 aggacaggcc acctgatgaa gcttctcagt gggcagcagg aagtaaaggc atccaagata
4621 gaatgggata cggaccaatg gaagattgag aactacatta atgagagcac agaagcccag
4681 agtgaacaga aagagaagtc gcttgagctc aaaaaagaag ttccaggata tggctatact
4741 gacaaactca tcttggcatt aattgttact ggaatactaa cgattttgat tatacttttc
4801 tgcctcattg tgatatgttg tcaccgaagg tcattacaag aagatgaaga aggattctca
4861 aggggcattt tcagatttct gccatggagg ggatgctctt cgcgaaggga gagtcaggat
4921 ggactttcct catttggaca gccgctctgg tttaaagatc tgtacaaacc tctcagtgcc
4981 acaagaataa ataatcatgc atggaagctg cacaagaagt catctaatga ggacaagatc
5041 ctcaacaggg accctgggga cagcgaagcc ccaacggagg gggaggagag tgaagccctg
5101 ccataggagg agaacacagc ccacctcagg cctcctgcaa aaatacatag aataaacaac
5161 aacagttact aaacgaaaaa aaaaaaaaaa
//