LOCUS BC040489 4652 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens SH3 domain binding glutamic acid-rich protein like 2,
mRNA (cDNA clone MGC:33682 IMAGE:5286092), complete cds.
ACCESSION BC040489
VERSION BC040489.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4652)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4652)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: i Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13899316.
FEATURES Location/Qualifiers
source 1..4652
/db_xref="H-InvDB:HIT000096187"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33682 IMAGE:5286092"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4652
/gene="SH3BGRL2"
/db_xref="GeneID:83699"
/db_xref="HGNC:HGNC:15567"
CDS 166..489
/gene="SH3BGRL2"
/codon_start=1
/product="SH3 domain binding glutamic acid-rich protein
like 2"
/protein_id="AAH40489.2"
/db_xref="GeneID:83699"
/db_xref="HGNC:HGNC:15567"
/translation="MVIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDTTMSEE
QRQWMYKNVPPEKKPTQGNPLPPQIFNGDRYCGDYDSFFESKESNTVFSFLGLKPRLA
SKAEP"
BASE COUNT 1383 a 860 c 957 g 1452 t
ORIGIN
1 gcttttatct gcggacccgc cgggagggag ccagatccca gcgatcttcc ccgacggcag
61 cgctttaccc agaggctgcc ggcggctcgt agctgggttc agctctgcgt ccacgccagc
121 ccggagcccg gggggcaagg ggtctgtccc gggcgcagcg agaggatggt catccgcgtg
181 ttcatcgcct cttcctcggg cttcgtggcg ataaagaaga agcagcaaga tgtggttaga
241 tttctggaag ccaacaagat agagtttgag gaggtggata ccacaatgtc agaagaacag
301 aggcaatgga tgtacaaaaa cgtccccccg gaaaagaaac ccactcaggg caaccccctg
361 ccacctcaga tatttaatgg cgaccgatac tgtggagatt atgacagttt ttttgaatcc
421 aaggaaagca acacagtctt ttcattttta ggcctgaaac cacggttggc atcaaaggca
481 gaaccttaga gaagaagagt ggaagatgac ggagatgcat tttgaagcac ccctggtact
541 cagcacacac atgcttacct aatgcatcac tgtgacaaaa gccacacgca ttatcagtaa
601 ctttgcttgc cacggaaaag gtgtttttga aagatgtggc tataatgaga attgcatgat
661 tgctttaaac caaatcaggt ggtggatttt ttttttctta ttctatttgc ctgcagttgc
721 ctcactcacc tggaaatacc gtcacctgtt acaggtgtac tttcttaatg actgaaagat
781 aagtgggtag caccgtcaga gagaaaatgt tggatctgcc ctaggttata gtagatgccg
841 gaattgcgta aacccacttc tctttaagct gcctggattg cacctttgaa atatgtctgc
901 caagttgtta gaatctttga atcagaagga aaaaaaggca gcgctggttg acaaagggtg
961 ttgaagattt ttgctgcaga atcagttaca aacatcacag ttcccatgct ttgtaataac
1021 acctggtgaa aaagttagat attctagact tgttttagta atggaaactc ttacctccac
1081 atattatcct acagatgttt ccagaaatcc ctgttgtaac caagtgatca gaactaagtt
1141 actgggatga caataattgc tatttgaaat atatgcttct ttatttcttg cgaggggcaa
1201 gtttcaccca aatgcctgag actgcttgaa agatatattt taagtggtgc actaattagt
1261 gaatatatag gaaaattatc tgacgagtat ctgaaggcat tttcagctct agcaatttat
1321 ttataatata taagttcata tattttttaa tccagctccc ctaacagaca gctgctgctt
1381 ctattttgtg aagggactat attttttgag aaaggaaaat ctcagttaga tatattttgt
1441 gaacccttga ttagacatat taaaatatac cagtgttgta gtaaaattta atttttcctt
1501 ttgttacttt tcatttgcct ctaattttgc ttgctcatat ttctggccaa tgtacagcct
1561 catatttttc agagtaatac agatacttgt tctcattccg tatatgagca caagtaaggt
1621 ttcagagcaa cacacatgag aaagagagta acccggaatt gtacttgtca agcaaaatct
1681 atactcctat tggagtggat gctgatgaac atcgaacata tctacttcat tagagcagag
1741 gctatttttc tgcattcttg tccctataac agggatgctt aatttttttt ttaacttaga
1801 gttttaaatt gccaaacatg ggaacagcct tgaataggat aaattttcag agggctgcct
1861 aaaatatttt atttctagca tcctgattct ggacttttca ttataattct gagcaggaaa
1921 tttataagaa attgaaagag cagaagaatt acagccctgt cacatgtgcc cagcactccg
1981 ccccatgcct tgctaaatgt agactaaaga acttgttgaa tgctaaggct gaaatcccaa
2041 cctgagattt gtagtccagg attacaacca gaaggaaagt atgacagatt tctacttaac
2101 tagaatggac acatgatcca caattttctc ttcaagggaa gctgttgtca aattatggat
2161 attactggtt agttgtcatt aagtaagatc caggtcaaat tccatttgac aaatcccagg
2221 gactatccag ggattttttt ttaactggat attgtgtttg agtatgtgag tcttctgata
2281 aaactcagaa tttcttttta agcagttgta aaaattgtca tgttgtaatt cattactcag
2341 ctaacattta gtctactctt gctagtgagt gccaagaacc aacttggtaa ggttgaggct
2401 ttgcaagtta actgctgggg ttataggatc aataccatac ttgctagaca aagctaccca
2461 gatttgtctt atattataat ttttgagtta accgtagtat acctattatg attatagtaa
2521 acagactagt gggtagtaat gctaaattac catcacagtt atgtgccatc tccccacccc
2581 attttttttt ttttttttga tcagcaaaga aatacaggag accagtctcg agtggtgctg
2641 tacttgttat gagtggggca gcagcacagt gtgtggcatt tacatggtac ccaggctcca
2701 cagagtacca agatgttgcc ctctgggacc acacttagct cagagaatat ggggtcctta
2761 cttgtattct gttatcagct gattttgaaa catataataa tgattttctt gttcccttct
2821 ttaactagct gcctttagat tttgataatc acagtcttaa aatactagga aagaagtgga
2881 tgggaattgt aggcatagat ttcatatcaa gggcatttca agacagaatt tttatttcct
2941 gtagtaggct tgctggagca aaggaaatgt gctgctaaaa atcaacttat gccattttaa
3001 aattagataa aatatggagt gccatcctgc taggtgagta cagaccagaa gaaaatttag
3061 ttgggaaaat acttgttttt ccaaattccg gtgttttatt acaatcaaag aagaggaaag
3121 caaggtattt tttcacctca gattctaata tattctagat ttgtttctgt tttatagatt
3181 taattcaata cctccacata gatgttttta tattacatga atttaataat aaactaaact
3241 tttttttgtc tcccgttatt gaaaagtacc aaagcttctt tctgttgtgt ttgattttac
3301 tataggggtt ttgctttttc tagagatact tttcatttaa cagcttttgt taagtgtcag
3361 gctgcacttt gctccatata attattgttt tcagatttca acttgtatgt gtttgtctct
3421 taaagcattg gtgaaatcac atattttata ttcagcataa aggagaataa attccagaaa
3481 acacatattc tgaaaatgga gtgtttgttc cctgccattt ttcacacctc tcttaatttt
3541 agttctgttt agttgagagg ctgtgatttt actcttgcct gtgaacctca tgcatgaaag
3601 cagcacatta agttgtaaaa atacaaacag atcgtgtgat cattcaagga gcaagacatg
3661 aggtcctgca cgagggtgtt gggaggacac cacagattca tctcagacag tgatcaggac
3721 tgaggatgga gttaaatcac tcagcccctg ggtggggtgg ggtggttcaa atggatgact
3781 gatctcctga gtacactgaa gccacaggct ggtggccatg ttctctgaat tgggtgcaga
3841 agacaagggc agagtggctg cggcacctat tacctttgta gcagccacat cagaaagcag
3901 aagaaaacag tatttctgaa ggcattgttt gaggttgatc tcagcactga acgatttcaa
3961 gccctacgca ccagaacaga aggagggtgg aggaagtgat cagagggaac gagctgtagg
4021 tttgcagaaa tgtgtgaaac caaaatgatc actgcctact tgtgattcaa atcttcagag
4081 ttttcctagt tcttctagaa atacatgtca ggtttgtttg ttcatccttt ctgtcagcat
4141 ggatcaagcc cctaaaatgt ggtaagtgtt gtcagagcag ggcaatatct ctactctcaa
4201 gtatgagggg aatagaaaca aagcagcagt tttagccagg gttcaatgat agagtggagg
4261 taaattaaga gcctccaggc tgtgattcac catttgagac attatacata atttgttttt
4321 gttataagcc atttgaattt ttaaaaaatt tcatacatgc aatggaatat agatatgtat
4381 atacacatat aatatatatg ctaaagtata aagagtaata ataatgacaa taaacaaacc
4441 cctgtgtgcc taccacccac cttattgcct ttcctttgag gtaccgtgtg cggtttcctg
4501 aacctatctc tatccctgtc tgatagaggg aacccctgta ctgaactttg tgttgaccat
4561 agccttcttg tctttcatca ctttatctcc atgtatgtat ccttaaagaa taataaatgg
4621 aattaaactg aaaaaaaaaa aaaaaaaaaa aa
//