LOCUS BC040443 1561 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aquaporin 11, mRNA (cDNA clone MGC:48975
IMAGE:5728157), complete cds.
ACCESSION BC040443
VERSION BC040443.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1561)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1561)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: j Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27370564.
FEATURES Location/Qualifiers
source 1..1561
/db_xref="H-InvDB:HIT000052388"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48975 IMAGE:5728157"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1561
/gene="AQP11"
/gene_synonym="AQPX1"
/db_xref="GeneID:282679"
/db_xref="HGNC:HGNC:19940"
/db_xref="MIM:609914"
CDS 359..1174
/gene="AQP11"
/gene_synonym="AQPX1"
/codon_start=1
/product="aquaporin 11"
/protein_id="AAH40443.1"
/db_xref="GeneID:282679"
/db_xref="HGNC:HGNC:19940"
/db_xref="MIM:609914"
/translation="MSPLLGLRSELQDTCTSLGLMLSVVLLMGLARVVARQQLHRPVA
HAFVLEFLATFQLCCCTHELQLLSEQHPAHPTWTLTLVYFFSLVHGLTLVGTSSNPCG
VMMQMMLGGMSPETGAVRLLAQLVSALCSRYCTSALWSLGLTQYHVSERSFACKNPIR
VDLLKAVITEAVCSFLFHSALLHFQEVRTKLRIHLLAALITFLVYAGGSLTGAVFNPA
LALSLHFMCFDEAFPQFFIVYWLAPSLGILLMILMFSFFLPWLHNNHTINKKE"
BASE COUNT 395 a 433 c 388 g 345 t
ORIGIN
1 tccgccgccg cgcccgccta caaggccctg agggagactg cggagggtga gtgcgcggtg
61 ggctcggctg accgttggcc ctgcggccgg cgccctaggc tacctccctt cgcctccccg
121 cgcctccccg cgcctccccg cctccccgcc tccccgcctc ctcggctctg gttccaacac
181 cccagcgcca agccggggag gcggggagga cttcttaagt gtgccgctcg ggagcctccc
241 gctcgtcccg ccccgagggg cgtgaggagg ggaggggctg tggacttcgg actcgggcct
301 ggagaccgcc tcctacccag agccggagcc cgcaacccgc tcaggcggcg acggagccat
361 gtcgccgctg ctggggctcc ggtccgagct gcaggacacc tgcacctcgc tgggactgat
421 gctgtcggtg gtgctgctca tggggctggc ccgcgtagtc gcccggcagc agctgcacag
481 gccggtggcc cacgccttcg tcctggagtt tctagccacc ttccagctct gctgctgcac
541 ccacgagctg caactgctga gcgaacagca ccccgcgcac cccacctgga cgctgacgct
601 cgtctacttc ttctcgcttg tgcatggcct gactctggtg ggcacgtcca gcaacccgtg
661 cggcgtgatg atgcagatga tgctgggggg catgtccccc gagacgggtg cggtgaggct
721 attggctcag ctggttagtg ccctgtgcag caggtactgc acaagcgcct tgtggagctt
781 gggtctgacc cagtatcacg tcagcgagag gagcttcgct tgcaagaatc ccatccgagt
841 cgacttgctc aaagcggtca tcacagaggc cgtctgctcc tttctcttcc acagcgctct
901 gctgcacttc caggaagtcc gaaccaagct tcgtatccac ctgctggctg cactcatcac
961 ctttttggtc tatgcaggag gaagtctaac aggagctgta tttaatccag ctttggcact
1021 ttcgctacat ttcatgtgtt ttgatgaagc attccctcag ttttttatag tatactggct
1081 ggctccttct ttaggtatat tgttgatgat tttgatgttc agctttttcc ttccatggct
1141 gcataacaac catacaatta ataaaaagga ataactgttc caaagactca gactaacata
1201 caggacagtc cagctggatg tgataaagat tttatcacct catatggaaa acaccggctg
1261 cactggattc atcagtgtta acttcctttg aggaagctgc cttatagttt tcatcactgg
1321 gactttaaaa aaaaattact gtgaaaatga ggtattctgt acttctcagt taagacttgt
1381 tctttgagtg atgtattaaa tgctgctaga aaagcctcat tacattaaat ataaatcaat
1441 cttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 a
//