LOCUS BC040210 2043 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens aldo-keto reductase family 1, member C1 (dihydrodiol
dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase),
mRNA (cDNA clone MGC:42600 IMAGE:4825338), complete cds.
ACCESSION BC040210
VERSION BC040210.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2043)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2043)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: m Column: 6.
FEATURES Location/Qualifiers
source 1..2043
/db_xref="H-InvDB:HIT000096067"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42600 IMAGE:4825338"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2043
/gene="AKR1C1"
/gene_synonym="2-ALPHA-HSD"
/gene_synonym="20-ALPHA-HSD"
/gene_synonym="C9"
/gene_synonym="DD1"
/gene_synonym="DDH"
/gene_synonym="H-37"
/gene_synonym="HAKRC"
/gene_synonym="MBAB"
/gene_synonym="MGC8954"
/db_xref="GeneID:1645"
/db_xref="HGNC:HGNC:384"
/db_xref="MIM:600449"
CDS 843..1814
/gene="AKR1C1"
/gene_synonym="2-ALPHA-HSD"
/gene_synonym="20-ALPHA-HSD"
/gene_synonym="C9"
/gene_synonym="DD1"
/gene_synonym="DDH"
/gene_synonym="H-37"
/gene_synonym="HAKRC"
/gene_synonym="MBAB"
/gene_synonym="MGC8954"
/codon_start=1
/product="aldo-keto reductase family 1, member C1
(dihydrodiol dehydrogenase 1; 20-alpha
(3-alpha)-hydroxysteroid dehydrogenase)"
/protein_id="AAH40210.1"
/db_xref="GeneID:1645"
/db_xref="HGNC:HGNC:384"
/db_xref="MIM:600449"
/translation="MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEA
GFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERS
LKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLA
KSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSA
LGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQR
IRQNVQVFEFQLTSEEMKAIDGLNRNVRYLTLDIFAGPPNYPFSDEY"
BASE COUNT 595 a 453 c 491 g 504 t
ORIGIN
1 gagaaagcca tgtaaccatg aaggcagaga ttgaagtgat tcaactataa gccaaggcat
61 gccaactgct actgggagcc accaaaagct agtcaaaggc aagggaacca tcttcccgag
121 agctttcatg gggagcatgg ccctataaac aactggattt ttgactcaag tctccagaac
181 tggaagagaa tacaatcctc ttttgttgtt ctaaaccatc caatttgcac aaaaacgtgt
241 tttgaaccta ctctaaccaa ctgtcaaaag gctgtgttaa gtgattccct gacaagaacc
301 gggatttagc tgaactaaga agcaaaaatt ctgcatcatt ttggtggcgt gtacagggac
361 atgaggaagg aaccttggcc attctgatgt ttaaccaaga gttgagctga gtggctctga
421 ccagcgtgga agatgagagc agcctgaact tacactgtga aaatgccctg gagaaatgca
481 gagatgcagg tttaatgaag tccatcaggg tgtccagttt caatcactaa ctgttggaac
541 tgatcctcag acaagccagg actcaagtac aagcccatct acaaccagat gagcccttag
601 ggccactggg gccatttctg actttgtgct cttcacacac ttccttacat tagaataatg
661 taagaaacgg ttgaactgga tgcaattttt atcacagctt gtgtaagact gcctctgtcc
721 ctcctctcac atgccattgg ttaaccagca gacagtgtgc tcaggggcgt tgccagctca
781 ttgctcttat agcctgtgag ggaggaagaa agaaacattt gccagccagg ctagtgacag
841 aaatggattc gaaatatcag tgtgtgaagc tgaatgatgg tcacttcatg cctgtcctgg
901 gatttggcac ctatgcgcct gcagaggttc ctaaaagtaa agctttagag gccaccaaat
961 tggcaattga agctggcttc cgccatattg attctgctca tttatacaat aatgaggagc
1021 aggttggact ggccatccga agcaagattg cagatggcag tgtgaagaga gaagacatat
1081 tctacacttc aaagctttgg tgcaattccc atcgaccaga gttggtccga ccagccttgg
1141 aaaggtcact gaaaaatctt caattggatt atgttgacct ctaccttatt cattttccag
1201 tgtctgtaaa gccaggtgag gaagtgatcc caaaagatga aaatggaaaa atactatttg
1261 acacagtgga tctctgtgcc acgtgggagg ccgtggagaa gtgtaaagat gcaggattgg
1321 ccaagtccat cggggtgtcc aacttcaacc gcaggcagct ggagatgatc ctcaacaagc
1381 cagggctcaa gtacaagcct gtctgcaacc aggtggaatg tcatccttac ttcaaccaga
1441 gaaaactgct ggatttctgc aagtcaaaag acattgttct ggttgcctat agtgctctgg
1501 gatcccaccg agaagaacca tgggtggacc cgaactcccc ggtgctcttg gaggacccag
1561 tcctttgtgc cttggcaaaa aagcacaagc gaaccccagc cctgattgcc ctgcgctacc
1621 agctacagcg tggggttgtg gtcctggcca agagctacaa tgagcagcgc atcagacaga
1681 acgtgcaggt gtttgaattc cagttgactt cagaggagat gaaagccata gatggcctaa
1741 acagaaatgt gcgatatttg acccttgata tttttgctgg cccccctaat tatccatttt
1801 ctgatgaata ttaacatgga gggcattgca tgaggtctac cagaaggccc tgcgtgtgga
1861 tggtgacaca gaggatggct ctatgctggt gactggacac atcgcctctg gttaaatctc
1921 tcctgcttgg tgatttcagc aagctacagc aaagcccatt ggccagaaag gaaagacaat
1981 aattttgttt tttcattttg aaaaaattaa atgctctctc ctaaaaaaaa aaaaaaaaaa
2041 aaa
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