LOCUS BC040147 742 bp mRNA linear HUM 13-DEC-2004
DEFINITION Homo sapiens G patch domain containing 4, mRNA (cDNA clone
IMAGE:3858998), partial cds.
ACCESSION BC040147
VERSION BC040147.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 742)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 742)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: a Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..742
/db_xref="H-InvDB:HIT000096023"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3858998"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>742
/gene="GPATC4"
/db_xref="GeneID:54865"
CDS 154..>742
/gene="GPATC4"
/codon_start=1
/product="GPATC4 protein"
/protein_id="AAH40147.1"
/db_xref="GeneID:54865"
/translation="MKFAEEQLLKHGWTQGKGLGRKENGITQALRVTLKQDTHGVGHD
PAKEFTNHWWNELFNKTAANLVVETGQDGVQIRSLSKETTRYNHPKPNLLYQKFVKMA
TLTSGGEKPNKDLESCSDDDNQGSKSPKILTDEMLLQACEGRTAHKAARLGITMKAKL
ARLEAQEQAFLARLKGQDPGAPQLQSESKPPKKKKK"
BASE COUNT 210 a 184 c 210 g 138 t
ORIGIN
1 cggatggcgg cgcacaagtc aggtccggca catgtttccg cggagcggac ccagcaatga
61 cggatgatat cacctcttct tctctggtga gagtctgagg atagagactt ttttctcacc
121 atgaatgtca ccccagaggt caagagtcgt gggatgaagt ttgctgagga gcagctgcta
181 aagcatggat ggactcaagg caaaggcctc ggccggaagg agaatggtat cactcaggct
241 ctcagggtga cactgaagca agacactcat ggggtaggac atgaccctgc caaggagttc
301 acaaaccact ggtggaatga gctcttcaac aagactgcgg ccaacttggt agtggaaact
361 gggcaggatg gagtacagat aaggagcctt tctaaggaga ccacccgtta taatcatccc
421 aagcccaact tgctgtatca gaagtttgtg aagatggcta cattgacttc aggtggagag
481 aagccaaaca aagacttgga gagctgcagt gatgacgaca accaggggtc caagtcccca
541 aagattctga ctgatgagat gctgctccaa gcctgtgagg ggcgaacagc acacaaggct
601 gcccgtcttg ggatcacaat gaaggccaag cttgctcgcc tagaggccca ggagcaggcc
661 ttcctggctc gtctcaaagg ccaggaccct ggggcccctc aactgcagtc agagagcaag
721 ccccccaaaa aaaaaaaaaa aa
//