LOCUS BC039724 2065 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens mannan-binding lectin serine peptidase 1 (C4/C2
activating component of Ra-reactive factor), mRNA (cDNA clone
IMAGE:5243260), partial cds.
ACCESSION BC039724
VERSION BC039724.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2065)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2065)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: f Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21264356.
FEATURES Location/Qualifiers
source 1..2065
/db_xref="H-InvDB:HIT000095894"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5243260"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2065
/gene="MASP1"
/gene_synonym="CRARF1"
/gene_synonym="MASP"
/gene_synonym="RaRF"
/db_xref="GeneID:5648"
/db_xref="MIM:600521"
CDS <1..1468
/gene="MASP1"
/gene_synonym="CRARF1"
/gene_synonym="MASP"
/gene_synonym="RaRF"
/codon_start=2
/product="MASP1 protein"
/protein_id="AAH39724.1"
/db_xref="GeneID:5648"
/db_xref="MIM:600521"
/translation="PHGIKEGREGADLFGRKTDFVVRFLGVQEQVKGEREERGKARGR
EGERGSVAGRGRRDLNGECQPIPETHRDLRTKIRHHGHHTGHELTGKSSWEDQGRAAG
STQGRKMRWLLLYYALCFSLSKASAHTVELNNMFGQIQSPGYPDSYPSDSEVTWNITV
PDGFRIKLYFMHFNLESSYLCEYDYVKVETEDQVLATFCGRETTDTEQTPGQEVVLSP
GSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSC
RFGYILHTDNRTCRVECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIELEEGFMVNL
QFEDIFDIEDHPEVPCPYDYIKIKVGPKVLGPFCGEKAPEPISTQSHSVLILFHSDNS
GENRGWRLSYRAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEM
DTFQIECLKDGTWSNKIPTCKKNEIDLESELKSEQVTE"
BASE COUNT 639 a 488 c 513 g 425 t
ORIGIN
1 gccgcacggg ataaaggagg gaagggaagg agcagatctt ttcggtagga agacagattt
61 tgttgtcagg ttcctgggag tgcaagagca agtcaaagga gagagagagg agagaggaaa
121 agccagaggg agagaggggg agaggggatc tgttgcaggc aggggaaggc gtgacctgaa
181 tggagaatgc cagccaattc cagagacaca cagggacctc agaacaaaga taaggcatca
241 cggacaccac accgggcacg agctcacagg caagtcaagc tgggaggacc aaggccgggc
301 agccgggagc acccaaggca ggaaaatgag gtggctgctt ctctattatg ctctgtgctt
361 ctccctgtca aaggcttcag cccacaccgt ggagctaaac aatatgtttg gccagatcca
421 gtcgcctggt tatccagact cctatcccag tgattcagag gtgacttgga atatcactgt
481 cccagatggg tttcggatca agctttactt catgcacttc aacttggaat cctcctacct
541 ttgtgaatat gactatgtga aggtagaaac tgaggaccag gtgctggcaa ccttctgtgg
601 cagggagacc acagacacag agcagactcc cggccaggag gtggtcctct cccctggctc
661 cttcatgtcc atcactttcc ggtcagattt ctccaatgag gagcgtttca caggctttga
721 tgcccactac atggctgtgg atgtggacga gtgcaaggag agggaggacg aggagctgtc
781 ctgtgaccac tactgccaca actacattgg cggctactac tgctcctgcc gcttcggcta
841 catcctccac acagacaaca ggacctgccg agtggagtgc agtgacaacc tcttcactca
901 aaggactggg gtgatcacca gccctgactt cccaaaccct taccccaaga gctctgaatg
961 cctgtatacc atcgagctgg aggagggttt catggtcaac ctgcagtttg aggacatatt
1021 tgacattgag gaccatcctg aggtgccctg cccctatgac tacatcaaga tcaaagttgg
1081 tccaaaagtt ttggggcctt tctgtggaga gaaagcccca gaacccatca gcacccagag
1141 ccacagtgtc ctgatcctgt tccatagtga caactcggga gagaaccggg gctggaggct
1201 ctcatacagg gctgcaggaa atgagtgccc agagctacag cctcctgtcc atgggaaaat
1261 cgagccctcc caagccaagt atttcttcaa agaccaagtg ctcgtcagct gtgacacagg
1321 ctacaaagtg ctgaaggata atgtggagat ggacacattc cagattgagt gtctgaagga
1381 tgggacgtgg agtaacaaga ttcccacctg taaaaaaaat gaaatcgatc tggagagcga
1441 actcaagtca gagcaagtga cagagtgaat gacgggaccc cacacaatgc agacatccag
1501 aaatggatca ctcccaagac ccctggggcc cagagctgca ccacccctcc ccacccacaa
1561 cacccccgtg cccctttcca tgtggattag aatgggtgct gaacaacatg atctcagcag
1621 ttgaagctgc tacgtgtgtg aaagcaaatt ctccacttga gggtttgccc atcattcaaa
1681 cactattcca gaaaataatg aaaaaaaaat gtgggattta ttttagcacc tctgagtgga
1741 ctgtactttt ctcaacggaa aaaaaaaatg cccttggtcc ttgagacaaa agatttaata
1801 tacaaccatg tggcctcagg ctgaccagat caaagtggtt tctaatccat tctacatgtc
1861 aagtttaaat gaaccagact gcctgtgact ttatgaatct gaaggtatta cctgttgctg
1921 ctttcttaac caccatgagt aggtaaagca aataataact cacagagtgt ggatttttga
1981 gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaa
//