LOCUS BC039573 2649 bp mRNA linear HUM 08-JUL-2008
DEFINITION Homo sapiens family with sequence similarity 175, member A, mRNA
(cDNA clone MGC:48664 IMAGE:6045433), complete cds.
ACCESSION BC039573
VERSION BC039573.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2649)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2649)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20589960.
FEATURES Location/Qualifiers
source 1..2649
/db_xref="H-InvDB:HIT000052207"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48664 IMAGE:6045433"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2649
/gene="FAM175A"
/gene_synonym="ABRA1"
/db_xref="GeneID:84142"
/db_xref="HGNC:HGNC:25829"
/db_xref="MIM:611143"
CDS 340..1242
/gene="FAM175A"
/gene_synonym="ABRA1"
/codon_start=1
/product="family with sequence similarity 175, member A"
/protein_id="AAH39573.1"
/db_xref="GeneID:84142"
/db_xref="HGNC:HGNC:25829"
/db_xref="MIM:611143"
/translation="MTFRERLLHKNLQEHFSNQDLVFLLLTPSIITESCSTHRLEHSL
YKPQKGLFHRVPLVVANLGMSEQLGYKTVSGSCMSTGFSRAVQTHSSKFFEEDGSLKE
VHKINEMYASLQEELKSICKKVEDSEQAVDKLVKDVNRLKREIEKRRGAQIQAAREKN
IQKDPQENIFLCQALRTFFPNSEFLHSCVMSLKNRHVSKSSCNYNHHLDVVDNLTLMV
EHTDIPEASPASTPQIIKHKALDLDDRWQFKRSRLLDTQDKRSKADTGSSNQDKASKM
SSPETDEEIEKMKGFGEYSRSPTF"
BASE COUNT 900 a 463 c 501 g 785 t
ORIGIN
1 ggcggcggta gcatggaggg ggagagtacg tcggcggtgc tctcgggctt tgtgctcggc
61 gcactcgctt tccagcacct caacacggac tcggacacgg aaggttttct tcttggggaa
121 gtaaaaggtg aagccaagaa cagcattact gattcccaaa tggatgatgt tgaagttgtt
181 tatacaattg acattcagaa atatattcca tgctatcagc tttttagctt ttataattct
241 tcaggcgaag taaatgagca agcactgaag aaaatattat caaatgtcaa aaagaatgtg
301 gtaggttggt acaaattccg tcgtcattca gatcagatca tgacgtttag agagaggctg
361 cttcacaaaa acttgcagga gcatttttca aaccaagacc ttgtttttct gctattaaca
421 ccaagtataa taacagaaag ctgctctact catcgactgg aacattcctt atataaacct
481 caaaaaggac tttttcacag ggtaccttta gtggttgcca atctgggcat gtctgaacaa
541 ctgggttata aaactgtatc aggttcctgt atgtccactg gttttagccg agcagtacaa
601 acacacagct ctaaattttt tgaagaagat ggatccttaa aggaggtaca taagataaat
661 gaaatgtatg cttcattaca agaggaatta aagagtatat gcaaaaaagt ggaagacagt
721 gaacaagcag tagataaact agtaaaggat gtaaacagat taaaacgaga aattgagaaa
781 aggagaggag cacagattca ggcagcaaga gagaagaaca tccaaaaaga ccctcaggag
841 aacatttttc tttgtcaggc attacggacc ttttttccaa attctgaatt tcttcattca
901 tgtgttatgt ctttaaaaaa tagacatgtt tctaaaagta gctgtaacta caaccaccat
961 ctcgatgtag tagacaatct gaccttaatg gtagaacaca ctgacattcc tgaagctagt
1021 ccagctagta caccacaaat cattaagcat aaagccttag acttagatga cagatggcaa
1081 ttcaagagat ctcggttgtt agatacacaa gacaaacgat ctaaagcaga tactggtagt
1141 agtaaccaag ataaagcatc caaaatgagc agcccagaaa cagatgaaga aattgaaaag
1201 atgaagggtt ttggtgaata ttcacggtct cctacatttt gatcctttta accttacaag
1261 gagatttttt tatttggctg atgggtaaag ccaaacattt ctattgtttt tactatgttg
1321 agctacttgc agtaagttca tttgttttta ctatgttcac ctgtttgcag taatacacag
1381 ataactctta gtgcatttac ttcacaaagt actttttcaa acatcagatg cttttatttc
1441 caaacctttt tttcaccttt cactaagttg ttgaggggaa ggcttacaca gacacattct
1501 ttagaattgg aaaagtgaga ccaggcacag tggctcacac ctgtaatccc agcacttagg
1561 gaagacaagt caggaggatt gattgaagct aggagttaga gaccagcctg ggcaacgtat
1621 tgagaccatg tctattaaaa aataaaatgg aaaagcaaga atagccttat tttcaaaata
1681 tggaaagaaa tttatatgaa aatttatctg agtcattaaa attctcctta agtgatactt
1741 ttttagaagt acattatggc tagagttgcc agataaaatg ctggatatca tgcaataaat
1801 ttgcaaaaca tcatctaaaa tttaaatttg tcctacattt gtacttgcta aatctggcag
1861 ccttaattat tacacaacta taacacaaca caaacagtaa tctctcccct agtttagagt
1921 cctttgcatg aaatttagca aatctatcat tttgaataca gtacaagcct ggtaatccag
1981 tgtatttggg ataggccagt ggaactcaga actgatacat atatacatgt atgtctatca
2041 tattcaatgt ctattaggtg taaatcatct cttcatgtaa aagacactac tggtttgagg
2101 gtagactcgt ctaggaatat tttgtccttc tgtgacagca ccactatcca tcccaatgta
2161 acatttctac aaagggaaga tatcttaacc aggcatactt atatttgcta gttggaaaat
2221 cattctgaac agttttaatt ccattctatt gaatggatta ttgtatgagc tatttgggga
2281 tcagatataa atgacaatca cacagaacca cttttattca acatagataa aatgtgatga
2341 gtgttaacat tttaaataag caatctgctt aatggacatt ggtatgaagg ggaagtgtca
2401 ttctttacct cactcctcaa acacttttct atccaaaggt tggtttgagt cagtattggc
2461 atcatacaac cacttactgt aaaataagtt tattagtggt aacgtgatag aatttattcc
2521 cgatatctga tgttacaaac tttagggtcc ttgagatatg caggatcctt gtatgtaact
2581 ggcataaacc ctgtaaagag ataattaaag ttcttgacaa aacataatga gcaaaaaaaa
2641 aaaaaaaaa
//