LOCUS BC039340 2624 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens Rho GTPase activating protein 20, mRNA (cDNA clone
MGC:43522 IMAGE:5268598), complete cds.
ACCESSION BC039340
VERSION BC039340.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2624)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2624)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: f Column: 12.
FEATURES Location/Qualifiers
source 1..2624
/db_xref="H-InvDB:HIT000052196"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43522 IMAGE:5268598"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2624
/gene="ARHGAP20"
/gene_synonym="KIAA1391"
/gene_synonym="RARHOGAP"
/db_xref="GeneID:57569"
CDS 316..2511
/gene="ARHGAP20"
/gene_synonym="KIAA1391"
/gene_synonym="RARHOGAP"
/codon_start=1
/product="ARHGAP20 protein"
/protein_id="AAH39340.1"
/db_xref="GeneID:57569"
/translation="MDQGNDEEKINTVQRLLDQLPRANVVLLRYLFGVLHNIEQHSSS
NQMTAFNLAVCVAPSILWPPASSSPELENEFTKKVSLLIQFLIENCLRIFGEEITSLF
REVSVRCDTRENASDISCFQLNDSSYDSLENELNEDVDAPCSDLVKKLGQGSRSMDSV
LTLSDYDLDQPEVEDLLTLSDFDLAHSKDEDVQMKRPLESKPVNILVYTKIPLRDHAR
APSAMCTPSYLSTAAANAAKSLRRHRRCSEPSIDYLDSKLSYLREFYQKKLRKSSCDA
ILSQKDEDYLKQNQPLQEEGKTCFKQSLVTGTDVSKKNATTQNTKKKSLSGSEGNHVK
LFPKSKPVAISVASYSPMSSQDHSKNQPFDVNTSGYSPPHTADALKGPRTHRRCSEPN
IEDQNRKLTYLRGIYSKKQHKTSCEAGLLHGEEDYLKRHKSLQMEGQKLINQSLVMGI
EVGKSSATNQNTEKVLPPRLNLCPRTSYSSLSSPGTSPSGSSVSSQDSAFSQISEHSV
FTPTETSSPIDCTFQAQRKREDLSPDFSNASHVSGMPGPSSGQACSRPAYTKKDTMEW
HSQMHSVTLHPSTWLRNGVASLKNWSLKKKAKAARPEEEKIASPKGPLEPPPHASGVP
EANSLQEEQKDLPLRAAEGLSPVQSAQRCSSSPFQDSERHCSSPFSLVESRLKLCMKS
HEEIEPGSQSSSGSLPWERASASSWTLEDATSPDSGPTVVCDIEDRNCC"
BASE COUNT 779 a 632 c 575 g 638 t
ORIGIN
1 attcttggaa atgctctaca tttttggaaa cacctacagt caaaatgagc tttaagcaga
61 gcttttgacc ttagcagtat cttctgcaga cctgtgtcag gctctcacct cccaaaggat
121 tggaatgcac cagagctagg ggtcgagaca aggccccagc ctgtatctca ggctgaaacg
181 tgaaaaccaa gttaaggaaa atatggtgaa gaagattctt gcatacccct actccagctg
241 agtgcccagg attttctgcg aaatattcca ggaagtattt tttcatcaga tctctatgat
301 cactgggtct ctgtaatgga tcaaggaaat gatgaagaga aaataaatac tgttcaaagg
361 ctattagacc agcttccgag agccaatgtt gttctcctaa ggtatctttt tggggtgtta
421 cacaacattg agcaacattc ctcatccaat cagatgactg catttaattt agctgtgtgt
481 gtcgctccaa gtattctttg gcctcctgct tcctccagcc cagaactaga aaacgaattt
541 acaaaaaagg tttccctgct tatacaattt ctgattgaga attgccttag gatatttgga
601 gaagaaatca cttccctctt cagagaggtt tcagtgagat gtgacactag agagaatgcc
661 tcagatattt cttgctttca actgaatgac tcctcctatg acagcttgga aaatgagcta
721 aatgaggatg ttgatgcacc atgcagtgac ttggtaaaga aacttggcca ggggagcaga
781 agcatggact ctgtcttaac cctcagtgac tatgatcttg accagcccga ggtggaagac
841 cttttaaccc taagcgactt tgacttggcc cattctaaag atgaagatgt tcaaatgaaa
901 cggcctcttg aatccaagcc ggtgaacatt ttagtgtaca caaagatccc actgcgggat
961 catgccaggg ccccatctgc catgtgcaca cccagctacc tgtccacagc tgcagcaaat
1021 gctgcaaaaa gcctgaggcg acaccggcgt tgctcagagc ccagcatcga ctatctggat
1081 tcaaagcttt cctacctcag ggagttttat cagaaaaagc tacgcaagtc cagctgtgat
1141 gcaattcttt ctcaaaaaga tgaagactat ctgaagcaga atcaacccct ccaggaggaa
1201 ggaaagacat gttttaaaca gagtttagtc acaggcactg atgtcagcaa gaaaaatgcc
1261 actactcaaa acactaagaa gaaaagcttg tctggtagtg aaggaaatca cgtgaaactt
1321 ttccctaagt ctaagccagt ggccatttct gtggcatctt atagtcctat gtcctcacag
1381 gatcattcca agaaccagcc ctttgatgtg aatacatctg gatactcccc accacacaca
1441 gcagatgccc tcaagggtcc aaggacacat cggcgctgct cagagcccaa catagaagac
1501 cagaaccgca agctgaccta tctcagggga atttattcaa agaaacaaca taaaaccagc
1561 tgtgaagctg gtctcttgca tggagaggag gattatctca aacggcataa gtctttgcaa
1621 atggaggggc agaagctcat taatcagagt ttagtcatgg ggattgaggt gggcaagagt
1681 agtgccacaa accaaaacac tgagaaggtt ttacccccaa gattaaacct ttgcccaagg
1741 accagctatt ccagcttatc ctccccaggc acttccccat ccggctcatc agtaagctcc
1801 caagacagtg ctttttctca gatttctgaa cactctgtgt ttacacccac tgagacttcc
1861 tctccaatag attgcacttt tcaggctcag agaaaacggg aagacctttc tcctgacttt
1921 agcaatgcca gccatgtttc cggaatgccc ggtccctcat cagggcaggc ttgcagccgc
1981 ccagcctata caaagaagga caccatggag tggcattcac aaatgcattc tgtaactctt
2041 catcccagca catggttgag aaatggtgtg gccagtttga aaaactggtc cctcaaaaag
2101 aaagcaaagg cagccagacc agaggaagag aaaatagctt ctccaaaagg acccttagag
2161 ccacccccac atgcttctgg tgttccagaa gccaactcac tgcaagagga acaaaaagac
2221 ttgcccttaa gggcagctga aggactgtcc cctgtgcagt cagcccaaag gtgtagttct
2281 tctcccttcc aggactcaga gagacactgt agctctccat tcagcctggt ggagagcaga
2341 cttaagctgt gcatgaagtc acatgaggaa atagagcctg gtagtcagag ctcttctggt
2401 tctctgcctt gggaaagagc ctcagccagc tcttggactc tagaggatgc gaccagccca
2461 gactcagggc ctacagtggt ctgcgacatt gaggacagaa actgctgcta acttttaaag
2521 ttgtttggtt ttcaaggcac tgataatgga tatgtatgaa gtccatgctg tctgttaaat
2581 aaaatgccat tctgcagaat taaccatcaa aaaaaaaaaa aaaa
//