LOCUS BC039312 2831 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens armadillo repeat containing 3, mRNA (cDNA clone
MGC:39786 IMAGE:5296302), complete cds.
ACCESSION BC039312
VERSION BC039312.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2831)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2831)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: m Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27436878.
FEATURES Location/Qualifiers
source 1..2831
/db_xref="H-InvDB:HIT000052191"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39786 IMAGE:5296302"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2831
/gene="ARMC3"
/gene_synonym="FLJ25845"
/gene_synonym="FLJ32827"
/gene_synonym="RP11-300B11.1"
/db_xref="GeneID:219681"
/db_xref="HGNC:HGNC:30964"
CDS 78..2696
/gene="ARMC3"
/gene_synonym="FLJ25845"
/gene_synonym="FLJ32827"
/gene_synonym="RP11-300B11.1"
/codon_start=1
/product="armadillo repeat containing 3"
/protein_id="AAH39312.1"
/db_xref="GeneID:219681"
/db_xref="HGNC:HGNC:30964"
/translation="MGKKIKKEVEPPPKDVFDPLMIESKKAATVVLMLNSPEEEILAK
ACEAIYKFALKGEENKTTLLELGAVEPLTKLLTHEDKIVRRNATMIFGILASNNDVKK
LLRELDVMNSVIAQLAPEEEVVIHEFASLCLANMSAEYTSKVQIFEHGGLEPLIRLLS
SPDPDVKKNSMECIYNLVQDFQCRAKLQELNAIPPILDLLKSEYPVIQLLALKTLGVI
ANDKESRTMLRDNQGLDHLIKILETKELNDLHIEALAVIANCLEDMDTMVQIQQTGGL
KKLLSFAENSTIPDIQKNAAKAITKAAYDPENRKLFHEQEVEKCLVALLGSENDGTKI
AASQAISAMCENSGSKDFFNNQGIPQLIQLLKSDNEEVREAAALALANLTTCNPANAN
AAAEADGIDPLINLLSSKRDGAIANAATVLTNMAMQEPLRLNIQNHDIMHAIISPLRS
ANTVVQSKAALAVTATACDVEARTELRNSGGLEPLVELLRSKNDEVRKHASWAVMVCA
GDELTANELCRLGALDILEEVNVSGTRKNKFSEAAYNKLLNNNLSLKYSQTGYLSSSN
IINDGFYDYGRINPGTKLLPLKELCLQEPSDLRAVLLINSKSYVSPPSSMEDKSDVGY
GQSISSSSSLRRSSKEKNKKNSYHFSAGFGSPIEDKSEPASGRNTVLSKSATKEKGWR
KSKGKKEEEKVKEEEEVMVVPKFVGEGSSDKEWCPPSDPDFSMYVYEVTKSILPITNI
KEQIEDLAKYVAEKMGGKIPKEKLPDFSWELHISELKFQLKSNVIPIGHVKKGIFYHR
ALLFKALADRIGIGCSLVRGEYGRAWNEVMLQNDSRKGVIGGLPAPEMYVIDLMFHPG
GLMKLRSREADLYRFI"
BASE COUNT 937 a 540 c 634 g 720 t
ORIGIN
1 gaggcacaac aagggactgg gggttcgtct gctgggtttg cggagcagct agctactcgg
61 cgggatctcc cggcaggatg ggtaaaaaga taaagaagga agtagagcct cctcctaagg
121 atgtgtttga cccattaatg attgaaagca aaaaagcagc aactgtggtg ttaatgctta
181 attctccaga agaggaaatt ttggctaaag catgtgaagc catttataaa tttgctttaa
241 aaggtgagga aaataaaaca accctccttg aacttggagc tgtggaacct ttaactaagc
301 tactcaccca tgaagacaaa attgtaagaa gaaatgctac tatgatattt ggaatcctgg
361 cttctaataa tgatgttaaa aaattgttaa gggagttaga tgtcatgaat tctgtcattg
421 cccagctcgc tccagaagaa gaagtagtta tccatgagtt tgctagtctt tgtctagcaa
481 acatgtctgc agagtacacc agtaaagtgc aaatatttga acatggggga ttagagccac
541 tcatcagact actgagtagc cctgacccgg atgtaaagaa gaactctatg gaatgcattt
601 acaacttggt gcaggatttt cagtgtcgag ctaaacttca agaactaaat gcaatacctc
661 ctatcttaga tctcttgaag tcagaatatc cagtgattca gttgttggct ctcaaaacct
721 taggtgttat tgcaaatgat aaggagtctc gaacaatgct aagagacaat caaggattgg
781 accatcttat taagatccta gaaactaagg aattgaatga ccttcatata gaagcacttg
841 cagtgatagc caattgcctt gaagacatgg atactatggt gcagattcag cagacagggg
901 gtcttaaaaa gctcctgtca tttgcagaaa actctacaat tcctgatatt cagaagaatg
961 cagcaaaagc cattactaaa gcagcttatg atcctgaaaa tagaaaactt tttcatgaac
1021 aagaggttga aaagtgcctt gtagcccttt tgggttctga aaatgatgga actaaaattg
1081 ctgcttccca agctatttca gcaatgtgtg agaattcagg cagcaaagat tttttcaata
1141 atcaggggat tccacagtta attcagttgc taaaaagtga caatgaagag gtacgggaag
1201 cagcagctct agccctggca aacctaacca cttgcaaccc tgctaatgca aacgctgctg
1261 ctgaagctga tggtattgat ccattaataa acctcctgtc tagtaaacga gatggagcca
1321 ttgccaacgc tgctacagta ttaacaaaca tggccatgca ggagcccctg cgcctgaaca
1381 tacagaatca cgacatcatg catgccatca tcagcccact gcgttctgca aacacagtcg
1441 tgcagagcaa agctgctctc gctgtcaccg caactgcgtg tgacgttgaa gcccggactg
1501 agttaagaaa ttctggtgga ttggagcccc tggtagagct gctacgctcc aagaatgatg
1561 aagtgaggaa gcacgccagt tgggcagtga tggtctgtgc tggtgacgag ctgacggcca
1621 atgaattatg caggctcggg gctttagata tccttgaaga agttaacgta tcaggaactc
1681 ggaaaaataa attcagtgag gcagcttata ataagttgct caataacaat ctttccctga
1741 aatacagcca gactggctat ttgtcatcaa gtaacataat taacgatgga ttctatgatt
1801 atggtcggat aaatcccggc accaaactgt tgcctttgaa ggagctctgc ttacaagaac
1861 caagtgacct acgggctgta ctcttaatca acagtaaatc ttacgtttct ccaccttcat
1921 ctatggaaga taaatcagat gttggttatg gacaaagtat ttcttcttca tcttccttaa
1981 gaagatcaag taaagaaaag aacaaaaaaa atagttatca ttttagtgct ggatttggat
2041 ctcccataga agacaaatca gagccagctt ctggacgaaa tactgttctc agcaaaagcg
2101 ccaccaaaga aaaaggatgg aggaaaagca aaggaaaaaa agaagaggaa aaagtgaaag
2161 aggaggaaga ggttatggtg gtaccaaaat ttgttggtga aggaagctct gacaaagaat
2221 ggtgtcctcc ctctgaccct gatttctcta tgtatgtgta tgaggtgacc aaatcaatac
2281 tgccaataac caatattaag gaacagattg aggatctggc aaagtatgta gcagaaaaaa
2341 tgggtggtaa gattccaaaa gagaaactac ctgatttcag ctgggaactt cacataagtg
2401 aactgaaatt tcaacttaaa tccaatgtta taccgattgg acatgtcaaa aaaggaatct
2461 tctaccatcg agctttgctt ttcaaggctc tggctgatag aattggcatt ggttgctccc
2521 tagttcgcgg agagtacggt agagcgtgga atgaagtcat gctgcagaat gactctcgga
2581 agggagtgat tgggggcctc cccgctcctg agatgtacgt gattgacctc atgttccatc
2641 caggtggact gatgaagttg agaagtcgag aggctgatct ttacagattc atttaagcca
2701 tcagacgaac acaagagagg ctcaaacaag aaattcactg tgtacactct ctaagacatt
2761 ctccaaattg attttatctc tttaaataaa aactttaaat aagaaaaaaa aaaaaaaaaa
2821 aaaaaaaaaa a
//